MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-24-P3

Family name MIR-24 (all species)
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-24-P2 
Orthologues Aca-Mir-24-P3  Ami-Mir-24-P3  Bta-Mir-24-P3  Cfa-Mir-24-P3  Cja-Mir-24-P3  Cmi-Mir-24-P3  Cpi-Mir-24-P3  Cpo-Mir-24-P3  Dno-Mir-24-P3  Dre-Mir-24-P3  Eca-Mir-24-P3  Ete-Mir-24-P3  Gga-Mir-24-P3  Gja-Mir-24-P3  Gmo-Mir-24-P3  Hsa-Mir-24-P3  Laf-Mir-24-P3  Lch-Mir-24-P3  Loc-Mir-24-P3  Mdo-Mir-24-P3  Mml-Mir-24-P3  Mmr-Mir-24-P3  Mmu-Mir-24-P3  Mun-Mir-24-P3a  Mun-Mir-24-P3b  Oan-Mir-24-P3  Ocu-Mir-24-P3  Pab-Mir-24-P3  Pbv-Mir-24-P3  Rno-Mir-24-P3  Sha-Mir-24-P3  Sto-Mir-24-P3  Tgu-Mir-24-P3  Tni-Mir-24-P3  Xla-Mir-24-P3c  Xla-Mir-24-P3d  Xtr-Mir-24-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051816.1: 77147016-77147075 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-24-P3)
Mir-23-P3 CM051816.1: 77146703-77146760 [+] UCSC Ensembl
Mir-27-P3 CM051816.1: 77146885-77146947 [+] UCSC Ensembl
Mir-24-P3 CM051816.1: 77147016-77147075 [+] UCSC Ensembl
Seed GGCUCAG
Precursor
(pre-Mir +30nt flank)
UCCAGUCUGUCUCACUGGGCUCUGCCUCCUGUGCCUACUGAGCUGAAACACAGUUGCUUUGUAUAAACUGGCUCAGUUCAGCAGGAACAGGAGUCUGGCCCUCUUCUGGAGACACCUGCC
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Structure
        10           20        30        40        50         
UCCAGUCUGUCUCACUG---|   CUGC       G   A         AA  CAGUUGCU 
                    GGCU    CUCCUGU CCU CUGAGCUGA  CA        U
                    CCGG    GAGGACA GGA GACUUGACU  GU        U
CCGUCCACAGAGGUCUUCUC^   UCU-       A   C         CG  CAAAUAUG 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
- +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Star sequence

Neu-Mir-24-P3_5p*

mirBase accessionNone
Sequence
0- GUGCCUACUGAGCUGAAACACA -22
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Mature sequence

Neu-Mir-24-P3_3p

mirBase accessionNone
Sequence
38- UGGCUCAGUUCAGCAGGAACAG -60
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