MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-24-P3

Family name MIR-24 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-24-P2 
Orthologues Aca-Mir-24-P3  Ami-Mir-24-P3  Bta-Mir-24-P3  Cfa-Mir-24-P3  Cja-Mir-24-P3  Cmi-Mir-24-P3  Cpi-Mir-24-P3  Cpo-Mir-24-P3  Dno-Mir-24-P3  Dre-Mir-24-P3  Eca-Mir-24-P3  Gga-Mir-24-P3  Gja-Mir-24-P3  Gmo-Mir-24-P3  Hsa-Mir-24-P3  Laf-Mir-24-P3  Lch-Mir-24-P3  Loc-Mir-24-P3  Mdo-Mir-24-P3  Mml-Mir-24-P3  Mmr-Mir-24-P3  Mmu-Mir-24-P3  Mun-Mir-24-P3a  Mun-Mir-24-P3b  Neu-Mir-24-P3  Oan-Mir-24-P3  Ocu-Mir-24-P3  Pab-Mir-24-P3  Pbv-Mir-24-P3  Rno-Mir-24-P3  Sha-Mir-24-P3  Sto-Mir-24-P3  Tgu-Mir-24-P3  Tni-Mir-24-P3  Xla-Mir-24-P3c  Xla-Mir-24-P3d  Xtr-Mir-24-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980397: 3706485-3706544 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-24-P3)		 Mir-181-P2c JH980397: 3680901-3680964 [-] UCSC
Mir-181-P1c JH980397: 3681114-3681174 [-] UCSC
Mir-23-P3 JH980397: 3706134-3706192 [+] UCSC
Mir-27-P3 JH980397: 3706321-3706382 [+] UCSC
Mir-24-P3 JH980397: 3706485-3706544 [+] UCSC
Seed GGCUCAG
Precursor
(pre-Mir +30nt flank)		 
ACAAGUCAGGCUCCCUGGGCUCUGCCUCCUGUGCCUACUGAGCUGAAACACAGUGGAUAUGUGCAGACUGGCUCAGUUCAGCAGGAACAGGAGUCGUGCCCCCUCGGAGCCUGUGGCCAC
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Structure
        10           20        30        40        50         
ACAAGUCAGGCUCCCUG---|  UC  C       G   A         AA  CAGUGGAU 
                    GGC  UG CUCCUGU CCU CUGAGCUGA  CA        A
                    CCG  GC GAGGACA GGA GACUUGACU  GU        U
CACCGGUGUCCGAGGCUCCC^  U-  U       A   C         CG  CAGACGUG 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsUGUG in loop
Tissue expression
- +
To
Star sequence

Ete-Mir-24-P3_5p*
mirBase accessionNone
Sequence 
0- GUGCCUACUGAGCUGAAACACA -22
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Mature sequence

Ete-Mir-24-P3_3p
mirBase accessionNone
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
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