MirGeneDB

MirGeneDB ID

Ete-Mir-24-P2

Family name MIR-24 (all species)
Seed GGCUCAG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-24-P1 
Orthologues Aca-Mir-24-P2  Ami-Mir-24-P2  Bta-Mir-24-P2  Cfa-Mir-24-P2  Cpi-Mir-24-P2  Cpo-Mir-24-P2  Dno-Mir-24-P2  Dre-Mir-24-P2a  Dre-Mir-24-P2b  Gga-Mir-24-P2  Hsa-Mir-24-P2  Mdo-Mir-24-P2  Mml-Mir-24-P2  Mmu-Mir-24-P2  Oan-Mir-24-P2  Ocu-Mir-24-P2  Rno-Mir-24-P2  Sha-Mir-24-P2  Sto-Mir-24-o2  Sto-Mir-24-P2  Tgu-Mir-24-P2  Xtr-Mir-24-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(echTel2)
JH980384: 3444858-3444917 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CUGCGGGCUGUCAUUUGGACCCGUCCUCCGGUGCCUACUGAGCUGAUAUCAGUUCUCAUUUCACACACUGGCUCAGUUCAGCAGGAACAGGAGUCGAGCCCUAGAGCAAAAAGACUUCCC
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Structure
        10        20           30        40        50          
CUGCGGGCUGUCAUUUGGACC---| UC    G  G   A         UA     UCUCAU 
                        CG  CUCC GU CCU CUGAGCUGA  UCAGU      \
                        GC  GAGG CA GGA GACUUGACU  GGUCA      U
CCCUUCAGAAAAACGAGAUCCCGA^ U-    A  A   C         C-     CACACU 
.       110       100         90        80         70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
To
Star sequence

Ete-Mir-24-P2_5p*

MirBase accessionNone
Sequence
0- GUGCCUACUGAGCUGAUAUCAGU -23
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Mature sequence

Ete-Mir-24-P2_3p

MirBase accessionNone
Sequence
38- UGGCUCAGUUCAGCAGGAACAG -60
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