MirGeneDB 2.1
MirGeneDB ID

Bta-Mir-24-P2

Family name MIR-24 (all species)
Seed GGCUCAG
Species Cow (Bos taurus)
MiRBase ID bta-mir-24-1
Paralogues Bta-Mir-24-P3 
Orthologues Aca-Mir-24-P2  Ami-Mir-24-P2  Cfa-Mir-24-P2  Cmi-Mir-24-P2  Cpi-Mir-24-P2  Cpo-Mir-24-P2  Dno-Mir-24-P2  Dre-Mir-24-P2a  Dre-Mir-24-P2b  Ete-Mir-24-P2  Gga-Mir-24-P2  Gmo-Mir-24-P2b  Hsa-Mir-24-P2  Lch-Mir-24-P2  Loc-Mir-24-P2  Mdo-Mir-24-P2  Mml-Mir-24-P2  Mmu-Mir-24-P2  Mun-Mir-24-P2  Oan-Mir-24-P2  Ocu-Mir-24-P2  Pbv-Mir-24-P2  Rno-Mir-24-P2  Sha-Mir-24-P2  Spt-Mir-24-P2  Sto-Mir-24-P2  Tgu-Mir-24-P2  Tni-Mir-24-P2b  Xla-Mir-24-P2c  Xla-Mir-24-P2d  Xtr-Mir-24-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037335.1: 81617799-81617858 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-24-P2)		 Mir-2475 NC_037335.1: 81616377-81616437 [+] UCSC Ensembl
Mir-23-P2 NC_037335.1: 81617032-81617091 [+] UCSC Ensembl
Mir-27-P2 NC_037335.1: 81617258-81617320 [+] UCSC Ensembl
Mir-24-P2 NC_037335.1: 81617799-81617858 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCGGGCUGUCAGUUGGACCCGCCCUCCGGUGCCUACUGAGCUGAUAUCAGUUCUCAUUUUACACACUGGCUCAGUUCAGCAGGAACAGGAGUCGAGCCCUAGAGCAAAGCCUUCCUGU
Get precursor sequence
Structure
        10        20           30        40        50          
CUCCGGGCUGUCAGUUGGACC---| CC    G  G   A         UA     UCUCAU 
                        CG  CUCC GU CCU CUGAGCUGA  UCAGU      \
                        GC  GAGG CA GGA GACUUGACU  GGUCA      U
UGUCCUUCCGAAACGAGAUCCCGA^ U-    A  A   C         C-     CACAUU 
.       110       100         90        80         70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-24-P2_5p*
mirBase accessionMIMAT0009250
Sequence 
0- GUGCCUACUGAGCUGAUAUCAGU -23
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Proposed targets TargetScanVert: bta-miR-24
Mature sequence

Bta-Mir-24-P2_3p
mirBase accessionNone
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
Get sequence