MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-24-P2

Family name MIR-24 (all species)
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-24-1
Paralogues Cpi-Mir-24-P3 
Orthologues Aca-Mir-24-P2  Ami-Mir-24-P2  Bta-Mir-24-P2  Cfa-Mir-24-P2  Cja-Mir-24-P2  Cmi-Mir-24-P2  Cpo-Mir-24-P2  Dno-Mir-24-P2  Dre-Mir-24-P2a  Dre-Mir-24-P2b  Eca-Mir-24-P2  Ete-Mir-24-P2  Gga-Mir-24-P2  Gmo-Mir-24-P2b  Hsa-Mir-24-P2  Laf-Mir-24-P2  Lch-Mir-24-P2  Loc-Mir-24-P2  Mdo-Mir-24-P2  Mml-Mir-24-P2  Mmr-Mir-24-P2  Mmu-Mir-24-P2  Mun-Mir-24-P2  Neu-Mir-24-P2  Oan-Mir-24-P2  Ocu-Mir-24-P2  Pab-Mir-24-P2  Pbv-Mir-24-P2  Rno-Mir-24-P2  Sha-Mir-24-P2  Spt-Mir-24-P2  Sto-Mir-24-P2  Tgu-Mir-24-P2  Tni-Mir-24-P2b  Xla-Mir-24-P2c  Xla-Mir-24-P2d  Xtr-Mir-24-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(chrPic1)		 JH584764: 1108440-1108499 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-24-P2)		 Mir-24-P2 JH584764: 1108440-1108499 [-] UCSC Ensembl
Mir-27-P2 JH584764: 1108949-1109011 [-] UCSC Ensembl
Mir-23-P2 JH584764: 1109160-1109219 [-] UCSC Ensembl
Seed GGCUCAG
Precursor
(pre-Mir +30nt flank)		 
GUUCCAGAUUGUUGAUGGACCCGUCCUCCGGUGCCUACUGAGCUGAUAUCAGUUCUGAUUUUACAUACUGGCUCAGUUCAGCAGGAACAGGAGUCGAGCCCUAAAGCAAAAAGAUGUGCC
Get precursor sequence
Structure
        10        20           30        40        50          
GUUCCAGAUUGUUGAUGGACC---| UC    G  G   A         UA     UCUGAU 
                        CG  CUCC GU CCU CUGAGCUGA  UCAGU      \
                        GC  GAGG CA GGA GACUUGACU  GGUCA      U
CCGUGUAGAAAAACGAAAUCCCGA^ U-    A  A   C         C-     UACAUU 
.       110       100         90        80         70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsNo
Tissue expression
- +
Te Te Te To
Star sequence

Cpi-Mir-24-P2_5p*
mirBase accessionMIMAT0037657
Sequence 
0- GUGCCUACUGAGCUGAUAUCAGU -23
Get sequence
Mature sequence

Cpi-Mir-24-P2_3p
mirBase accessionMIMAT0037658
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
Get sequence