Mir-24-P2

MirGeneDB ID

Neu-Mir-24-P2

Family name

MIR-24 (all species)

Species

Tammar Wallaby (Notamacropus eugenii)

MiRBase ID

Paralogues

Neu-Mir-24-P3

Orthologues

Aca-Mir-24-P2 Ami-Mir-24-P2 Bta-Mir-24-P2 Cfa-Mir-24-P2 Cja-Mir-24-P2 Cmi-Mir-24-P2 Cpi-Mir-24-P2 Cpo-Mir-24-P2 Dno-Mir-24-P2 Dre-Mir-24-P2a Dre-Mir-24-P2b Eca-Mir-24-P2 Ete-Mir-24-P2 Gga-Mir-24-P2 Gmo-Mir-24-P2b Hsa-Mir-24-P2 Laf-Mir-24-P2 Lch-Mir-24-P2 Loc-Mir-24-P2 Mdo-Mir-24-P2 Mml-Mir-24-P2 Mmr-Mir-24-P2 Mmu-Mir-24-P2 Mun-Mir-24-P2 Oan-Mir-24-P2 Ocu-Mir-24-P2 Pab-Mir-24-P2 Pbv-Mir-24-P2 Rno-Mir-24-P2 Sha-Mir-24-P2 Spt-Mir-24-P2 Sto-Mir-24-P2 Tgu-Mir-24-P2 Tni-Mir-24-P2b Xla-Mir-24-P2c Xla-Mir-24-P2d Xtr-Mir-24-P2

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(GCA_028372415.1_mMacEug1.pri)

CM051815.1: 329061854-329061913 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-24-P2)

Mir-24-P2 CM051815.1: 329061854-329061913 [-] UCSC Ensembl
Mir-27-P2 CM051815.1: 329062436-329062498 [-] UCSC Ensembl
Mir-23-P2 CM051815.1: 329062670-329062727 [-] UCSC Ensembl

Seed

GGCUCAG

Precursor
(pre-Mir +30nt flank)

UUCUGAGUUGUGGAUUGGACCCGCCCUCCGGUGCCUACUGAGCUGAUAACAGUUCUGAUUUUACACACUGGCUCAGUUCAGCAGGAACAGGAGUCGAGCCCGAGAGCAAAAAAGACAGCC

Get precursor sequence

Structure

        10        20           30        40        50          
UUCUGAGUUGUGGAUUGGACC---| CC    G  G   A         UAA    UCUGAU 
                        CG  CUCC GU CCU CUGAGCUGA   CAGU      \
                        GC  GAGG CA GGA GACUUGACU   GUCA      U
CCGACAGAAAAAACGAGAGCCCGA^ U-    A  A   C         CG-    CACAUU 
.       110       100         90        80         70

Deep sequencing

Go to detailed chart

3' NTU

Yes

Motifs

Tissue expression

Br	Ce	Fi	Li	Mi	Mi	Mi	Mi	Mi	Ov	Se	Se	Te	Te	Te

Star sequence

Neu-Mir-24-P2_5p* (predicted)

mirBase accession

None

Sequence

0- GUGCCUACUGAGCUGAUAACAGU -23

Get sequence

Mature sequence

Neu-Mir-24-P2_3p

mirBase accession

None

Sequence

38- UGGCUCAGUUCAGCAGGAACAG -60

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