MirGeneDB 3.0
93 microRNA genes with seed GGCUCAG
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pma-Mir-24-o1 pma-mir-24 MIR-24 GGCUCAG None MIMAT0019405 NC_046103.1 7153250 7153310 - P. marinus Vertebrata Yes 1
Dre-Mir-24-P1 dre-mir-24b MIR-24 GGCUCAG MIMAT0048662 MIMAT0048663 chr2 33905775 33905834 + Gnathostomata Vertebrata Yes
Gmo-Mir-24-P1 gmo-mir-24a-4 MIR-24 GGCUCAG MIMAT0044047 MIMAT0044048 contig393630 353 416 + Gnathostomata Vertebrata No
Lch-Mir-24-P1 None MIR-24 GGCUCAG None None JH126762.1 1801884 1801943 - Gnathostomata Vertebrata Unknown
Loc-Mir-24-P1 None MIR-24 GGCUCAG None None LG10 2473205 2473264 - Gnathostomata Vertebrata No
Sto-Mir-24-P1 None MIR-24 GGCUCAG None None BFAA01002570.1 216501 216561 - Gnathostomata Vertebrata Yes 1
Tni-Mir-24-P1 None MIR-24 GGCUCAG None None 15_random 3093022 3093080 - Gnathostomata Vertebrata Yes
Aca-Mir-24-P2 aca-mir-24-2 MIR-24 GGCUCAG MIMAT0021901 MIMAT0021900 2 40591325 40591384 - Gnathostomata Vertebrata Yes
Ami-Mir-24-P2 ami-mir-24-1 MIR-24 GGCUCAG MIMAT0038061 MIMAT0038062 NW_017713772.1 16892177 16892236 - Gnathostomata Vertebrata Yes
Bta-Mir-24-P2 bta-mir-24-1 MIR-24 GGCUCAG MIMAT0009250 None NC_037335.1 81617799 81617858 + Gnathostomata Vertebrata Yes
Cfa-Mir-24-P2 cfa-mir-24-1 MIR-24 GGCUCAG None MIMAT0006614 chr1 71677609 71677668 - Gnathostomata Vertebrata Yes
Cja-Mir-24-P2 None MIR-24 GGCUCAG None None CM021915.1 77750879 77750938 + Gnathostomata Vertebrata Yes
Cmi-Mir-24-P2 None MIR-24 GGCUCAG None None KI635929.1 200598 200657 + Gnathostomata Vertebrata Yes
Cpi-Mir-24-P2 cpi-mir-24-1 MIR-24 GGCUCAG MIMAT0037657 MIMAT0037658 JH584764 1108440 1108499 - Gnathostomata Vertebrata Yes
Cpo-Mir-24-P2 cpo-mir-24-1 MIR-24 GGCUCAG MIMAT0046880 MIMAT0046881 scaffold_42 4055099 4055157 - Gnathostomata Vertebrata Yes
Dno-Mir-24-P2 dno-mir-24a MIR-24 GGCUCAG MIMAT0047532 MIMAT0047533 JH570415 2090841 2090900 + Gnathostomata Vertebrata Yes
Eca-Mir-24-P2 eca-mir-24-2 MIR-24 GGCUCAG None MIMAT0012987 CM009170.1 2131867 2131926 - Gnathostomata Vertebrata Yes
Ete-Mir-24-P2 None MIR-24 GGCUCAG None None JH980384 3444858 3444917 - Gnathostomata Vertebrata Yes
Gga-Mir-24-P2 gga-mir-24 MIR-24 GGCUCAG MIMAT0026548 MIMAT0001188 Z 41661400 41661459 + Gnathostomata Vertebrata Yes
Hsa-Mir-24-P2 hsa-mir-24-1 MIR-24 GGCUCAG MIMAT0000079 MIMAT0000080 chr9 95086026 95086085 + Gnathostomata Vertebrata Yes
Laf-Mir-24-P2 None MIR-24 GGCUCAG None None GL010033.1 2905516 2905575 - Gnathostomata Vertebrata Yes
Lch-Mir-24-P2 None MIR-24 GGCUCAG None None JH126823.1 175961 176020 - Gnathostomata Vertebrata Unknown
Loc-Mir-24-P2 None MIR-24 GGCUCAG None None LG2 32737407 32737466 - Gnathostomata Vertebrata Yes
Mdo-Mir-24-P2 mdo-mir-24-1 MIR-24 GGCUCAG None MIMAT0004175 6 17696509 17696568 + Gnathostomata Vertebrata Yes
Mml-Mir-24-P2 mml-mir-24-1 MIR-24 GGCUCAG MIMAT0002336 MIMAT0002337 CM014350.1 112741697 112741756 - Gnathostomata Vertebrata Yes
Mmr-Mir-24-P2 mmr-mir-24 MIR-24 GGCUCAG None MIMAT0049226 CM007670.1 10486419 10486478 + Gnathostomata Vertebrata Yes
Mmu-Mir-24-P2 mmu-mir-24-1 MIR-24 GGCUCAG MIMAT0000218 MIMAT0000219 chr13 63301213 63301272 + Gnathostomata Vertebrata Yes
Mun-Mir-24-P2 None MIR-24 GGCUCAG None None LR594633.1 206442381 206442440 - Gnathostomata Vertebrata Yes
Neu-Mir-24-P2 None MIR-24 GGCUCAG None None CM051815.1 329061854 329061913 - Gnathostomata Vertebrata Yes
Oan-Mir-24-P2 oan-mir-24-1 MIR-24 GGCUCAG MIMAT0006954 MIMAT0006955 NC_041753.1 69581866 69581924 + Gnathostomata Vertebrata Yes 1
Ocu-Mir-24-P2 ocu-mir-24-1 MIR-24 GGCUCAG MIMAT0048130 MIMAT0048131 chr1 74102787 74102846 + Gnathostomata Vertebrata Yes
Pab-Mir-24-P2 None MIR-24 GGCUCAG None None CM054692.2 86216239 86216298 + Gnathostomata Vertebrata Yes
Pbv-Mir-24-P2 pbv-mir-24-1 MIR-24 GGCUCAG MIMAT0038856 MIMAT0038857 KE954626.1 205436 205495 + Gnathostomata Vertebrata Yes
Rno-Mir-24-P2 rno-mir-24-1 MIR-24 GGCUCAG MIMAT0003153 MIMAT0000794 chr17 823973 824032 + Gnathostomata Vertebrata Yes
Sha-Mir-24-P2 sha-mir-24-1 MIR-24 GGCUCAG None MIMAT0022787 GL841474.1 1160665 1160724 + Gnathostomata Vertebrata Yes
Spt-Mir-24-P2 None MIR-24 GGCUCAG None None QEPC01008874.1 6803606 6803665 + Gnathostomata Vertebrata Unknown
Sto-Mir-24-P2 None MIR-24 GGCUCAG None None BFAA01002700.1 238946 239005 - Gnathostomata Vertebrata Yes 1
Tgu-Mir-24-P2 tgu-mir-24 MIR-24 GGCUCAG MIMAT0026994 MIMAT0014539 Z 10608541 10608600 - Gnathostomata Vertebrata Yes
Xtr-Mir-24-P2 xtr-mir-24a MIR-24 GGCUCAG MIMAT0003653 MIMAT0003654 chr1 123464320 123464378 + Gnathostomata Vertebrata Yes
Dre-Mir-24-P2a dre-mir-24-1 MIR-24 GGCUCAG None MIMAT0001792 chr10 15960847 15960904 + Clupeocephala Vertebrata Yes 1
Dre-Mir-24-P2b dre-mir-24-3 MIR-24 GGCUCAG None MIMAT0001792 chr8 30162533 30162590 - Clupeocephala Vertebrata Yes 1
Gmo-Mir-24-P2b gmo-mir-24a-3 MIR-24 GGCUCAG MIMAT0044116 MIMAT0044048 GeneScaffold_1288 2079157 2079215 - Clupeocephala Vertebrata Yes 1
Tni-Mir-24-P2b tni-mir-24-1 MIR-24 GGCUCAG None MIMAT0003066 12 8518120 8518178 + Clupeocephala Vertebrata Yes
Xla-Mir-24-P2c xla-mir-24a-2 MIR-24 GGCUCAG MIMAT0046550 MIMAT0046551 NC_030724.1 133829567 133829625 + X. laevis Vertebrata Yes
Xla-Mir-24-P2d xla-mir-24a-1 MIR-24 GGCUCAG MIMAT0046550 MIMAT0046551 NC_030725.1 110864858 110864916 + X. laevis Vertebrata Yes
Aca-Mir-24-P3 aca-mir-24-1 MIR-24 GGCUCAG MIMAT0021899 MIMAT0021900 2 29157652 29157711 - Gnathostomata Vertebrata Yes
Ami-Mir-24-P3 ami-mir-24-2 MIR-24 GGCUCAG MIMAT0038063 MIMAT0038062 NW_017713323.1 200859 200919 + Gnathostomata Vertebrata Yes 1
Bta-Mir-24-P3 bta-mir-24-2 MIR-24 GGCUCAG None MIMAT0003840 NC_037334.1 11839043 11839102 + Gnathostomata Vertebrata Yes
Cfa-Mir-24-P3 cfa-mir-24-2 MIR-24 GGCUCAG None MIMAT0006614 chr20 48620685 48620744 + Gnathostomata Vertebrata Yes
Cja-Mir-24-P3 None MIR-24 GGCUCAG None None CM021936.1 12279644 12279703 - Gnathostomata Vertebrata Yes
Cmi-Mir-24-P3 None MIR-24 GGCUCAG None None KI635928.1 356764 356823 + Gnathostomata Vertebrata Yes 1
Cpi-Mir-24-P3 cpi-mir-24-2 MIR-24 GGCUCAG MIMAT0037659 MIMAT0037658 JH584948 868114 868173 - Gnathostomata Vertebrata No
Cpo-Mir-24-P3 cpo-mir-24-2 MIR-24 GGCUCAG MIMAT0046882 MIMAT0046881 scaffold_42 12931984 12932043 + Gnathostomata Vertebrata Yes
Dno-Mir-24-P3 dno-mir-24b MIR-24 GGCUCAG MIMAT0047534 MIMAT0047535 AAGV03195862 467 526 + Gnathostomata Vertebrata Yes
Dre-Mir-24-P3 dre-mir-24-2 MIR-24 GGCUCAG None MIMAT0001792 chr3 13412992 13413050 + Gnathostomata Vertebrata Yes 1
Eca-Mir-24-P3 eca-mir-24-1 MIR-24 GGCUCAG None MIMAT0012987 CM009154.1 46233360 46233419 + Gnathostomata Vertebrata Yes
Ete-Mir-24-P3 None MIR-24 GGCUCAG None None JH980397 3706485 3706544 + Gnathostomata Vertebrata Yes 1
Gga-Mir-24-P3 None MIR-24 GGCUCAG None None 30 1398627 1398686 + Gnathostomata Vertebrata Yes 1
Gja-Mir-24-P3 None MIR-24 GGCUCAG None None NW_015175453.1 135655 135714 - Gnathostomata Vertebrata Yes 1
Gmo-Mir-24-P3 gmo-mir-24a-2 MIR-24 GGCUCAG MIMAT0044292 MIMAT0044048 GeneScaffold_4493 201873 201931 - Gnathostomata Vertebrata Yes 1 1
Hsa-Mir-24-P3 hsa-mir-24-2 MIR-24 GGCUCAG MIMAT0004497 MIMAT0000080 chr19 13836289 13836348 - Gnathostomata Vertebrata Yes
Laf-Mir-24-P3 None MIR-24 GGCUCAG None None GL010053.1 29291382 29291441 + Gnathostomata Vertebrata Yes
Lch-Mir-24-P3 None MIR-24 GGCUCAG None None JH126758.1 373059 373117 - Gnathostomata Vertebrata Unknown
Loc-Mir-24-P3 None MIR-24 GGCUCAG None None LG6 12902019 12902078 - Gnathostomata Vertebrata Yes 1
Mdo-Mir-24-P3 mdo-mir-24-2 MIR-24 GGCUCAG MIMAT0026712 MIMAT0004175 3 446526151 446526210 + Gnathostomata Vertebrata Yes
Mml-Mir-24-P3 mml-mir-24-2 MIR-24 GGCUCAG None MIMAT0002337 CM014354.1 13435440 13435499 - Gnathostomata Vertebrata Yes
Mmr-Mir-24-P3 None MIR-24 GGCUCAG None None CM007684.1 1345695 1345754 - Gnathostomata Vertebrata Yes
Mmu-Mir-24-P3 mmu-mir-24-2 MIR-24 GGCUCAG MIMAT0005440 MIMAT0000219 chr8 84208839 84208896 + Gnathostomata Vertebrata Yes
Neu-Mir-24-P3 None MIR-24 GGCUCAG None None CM051816.1 77147016 77147075 + Gnathostomata Vertebrata Yes
Oan-Mir-24-P3 oan-mir-24-2 MIR-24 GGCUCAG MIMAT0031092 MIMAT0006955 Oan-Mir-24_27-P1_KAAE-cwe25b12 394 453 + Gnathostomata Vertebrata Yes
Ocu-Mir-24-P3 ocu-mir-24-2 MIR-24 GGCUCAG MIMAT0048132 MIMAT0048131 chrUn0990 23718 23778 + Gnathostomata Vertebrata Yes
Pab-Mir-24-P3 None MIR-24 GGCUCAG None None CM054699.2 13876094 13876153 - Gnathostomata Vertebrata Yes
Pbv-Mir-24-P3 pbv-mir-24-2 MIR-24 GGCUCAG None MIMAT0038857 KE953590.1 99568 99627 - Gnathostomata Vertebrata Yes 1
Rno-Mir-24-P3 rno-mir-24-2 MIR-24 GGCUCAG MIMAT0005441 MIMAT0000794 chr19 25318887 25318944 + Gnathostomata Vertebrata Yes
Sha-Mir-24-P3 sha-mir-24-2 MIR-24 GGCUCAG None MIMAT0022787 GL841415.1 821300 821359 + Gnathostomata Vertebrata Yes
Sto-Mir-24-P3 None MIR-24 GGCUCAG None None BFAA01001728.1 147134 147193 - Gnathostomata Vertebrata Yes 1
Tgu-Mir-24-P3 None MIR-24 GGCUCAG None None 30 3317000 3317059 + Gnathostomata Vertebrata Yes 1
Tni-Mir-24-P3 tni-mir-24-2 MIR-24 GGCUCAG None MIMAT0003066 3 8971072 8971130 + Gnathostomata Vertebrata Yes 1 1
Xtr-Mir-24-P3 xtr-mir-24b MIR-24 GGCUCAG None MIMAT0003655 chr3 129999419 129999478 + Gnathostomata Vertebrata Yes 1 1
Mun-Mir-24-P3a None MIR-24 GGCUCAG None None LR594634.1 194255393 194255452 - M. unicolor Vertebrata Yes
Mun-Mir-24-P3b None MIR-24 GGCUCAG None None LR594634.1 194188903 194188962 - M. unicolor Vertebrata Yes
Xla-Mir-24-P3c xla-mir-24b-1 MIR-24 GGCUCAG None MIMAT0011146 NC_030728.1 133946953 133947013 + X. laevis Vertebrata Yes 1 1
Xla-Mir-24-P3d None MIR-24 GGCUCAG None None NW_016694811.1 2508830 2508890 + X. laevis Vertebrata Yes 1 1 1
Lch-Mir-24-P4 None MIR-24 GGCUCAG None None JH127091.1 1152354 1152413 - Gnathostomata Vertebrata Unknown 1
Loc-Mir-24-P4 None MIR-24 GGCUCAG None None LG19 5781223 5781282 + Gnathostomata Vertebrata Yes 1
Sto-Mir-24-P4 None MIR-24 GGCUCAG None None BFAA01000014.1 1439309 1439368 + Gnathostomata Vertebrata No
Dre-Mir-24-P4a dre-mir-24-4 MIR-24 GGCUCAG None MIMAT0001792 chr22 5307502 5307561 + Clupeocephala Vertebrata Yes 1
Gmo-Mir-24-P4a gmo-mir-24a-1 MIR-24 GGCUCAG None MIMAT0044048 GeneScaffold_1112 349423 349481 - Clupeocephala Vertebrata Yes
Tni-Mir-24-P4a None MIR-24 GGCUCAG None None 1 16060478 16060537 + Clupeocephala Vertebrata Yes 1 1
Tni-Mir-24-P4b None MIR-24 GGCUCAG None None 15_random 2810523 2810582 + Clupeocephala Vertebrata No 1
Ebu-Mir-24-P5 None MIR-24 GGCUCAG None None FYBX02009499.1 1845596 1845653 - E. burgeri Vertebrata Yes 1
Eca-Novel-3 None ECA-NOVEL-3 GGCUCAG None None CM009167.1 37824427 37824482 + E. caballus E. caballus No
Csc-Novel-9 None CSC-NOVEL-9 GGCUCAG None None NW_019384497.1 15326 15383 + C. sculpturatus C. sculpturatus No

(red - mature/co-mature, blue - star)

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