MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-24-P3

Family name MIR-24 (all species)
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-24-P1  Loc-Mir-24-P2  Loc-Mir-24-P4 
Orthologues Aca-Mir-24-P3  Ami-Mir-24-P3  Bta-Mir-24-P3  Cfa-Mir-24-P3  Cja-Mir-24-P3  Cmi-Mir-24-P3  Cpi-Mir-24-P3  Cpo-Mir-24-P3  Dno-Mir-24-P3  Dre-Mir-24-P3  Eca-Mir-24-P3  Ete-Mir-24-P3  Gga-Mir-24-P3  Gja-Mir-24-P3  Gmo-Mir-24-P3  Hsa-Mir-24-P3  Laf-Mir-24-P3  Lch-Mir-24-P3  Mdo-Mir-24-P3  Mml-Mir-24-P3  Mmr-Mir-24-P3  Mmu-Mir-24-P3  Mun-Mir-24-P3a  Mun-Mir-24-P3b  Neu-Mir-24-P3  Oan-Mir-24-P3  Ocu-Mir-24-P3  Pab-Mir-24-P3  Pbv-Mir-24-P3  Rno-Mir-24-P3  Sha-Mir-24-P3  Sto-Mir-24-P3  Tgu-Mir-24-P3  Tni-Mir-24-P3  Xla-Mir-24-P3c  Xla-Mir-24-P3d  Xtr-Mir-24-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(LepOcu1)		 LG6: 12902019-12902078 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-24-P3)		 Mir-24-P3 LG6: 12902019-12902078 [-] Ensembl
Mir-27-P3 LG6: 12902378-12902439 [-] Ensembl
Seed GGCUCAG
Precursor
(pre-Mir +30nt flank)		 
CCUGUCUGUCUCUCAGUGGGCCUGUCUCCUGGGCCUGCUGUGCUGAAUAUCAGUGCUCUCAGUCUAGCUGGCUCAGUUCAGCAGGAACAGGAGCCCUGUCUGCCGAGGAAGAGAGAGGGG
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Structure
        10               20        30        40        50        60
CCUGUCUGUCUCUCAGU-------|   CUGUC     GG       U     AUA     GCUCU 
                        GGGC     UCCUG  CCUGCUG GCUGA   UCAGU     C
                        CCCG     AGGAC  GGACGAC UGACU   GGUCG     A
GGGGAGAGAGAAGGAGCCGUCUGU^   -----     AA       U     C--     AUCUG 
.       110       100             90        80          70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14)
Tissue expression
- +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-24-P3_5p*
mirBase accessionNone
Sequence 
0- GGGCCUGCUGUGCUGAAUAUCAGU -24
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Mature sequence

Loc-Mir-24-P3_3p
mirBase accessionNone
Sequence 
38- UGGCUCAGUUCAGCAGGAACAG -60
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