MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-770

Family name MIR-770 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-770
Paralogues
Orthologues Cja-Mir-770  Eca-Mir-770  Hsa-Mir-770  Mml-Mir-770  Mmr-Mir-770  Mmu-Mir-770  Pab-Mir-770 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(rn6)		 chr6: 133682975-133683030 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-770)		 Mir-770 chr6: 133682975-133683030 [+] UCSC Ensembl
Mir-673 chr6: 133691391-133691453 [+] UCSC Ensembl
Mir-493 chr6: 133699522-133699583 [+] UCSC Ensembl
Mir-337-as chr6: 133705943-133706003 [-] UCSC Ensembl
Mir-337 chr6: 133705948-133706001 [+] UCSC Ensembl
Mir-540 chr6: 133706216-133706274 [+] UCSC Ensembl
Mir-431 chr6: 133711444-133711507 [+] UCSC Ensembl
Mir-433 chr6: 133712345-133712418 [+] UCSC Ensembl
Mir-127 chr6: 133713452-133713507 [+] UCSC Ensembl
Mir-136-v2 chr6: 133716775-133716830 [+] UCSC Ensembl
Mir-136-v1 chr6: 133716775-133716830 [+] UCSC Ensembl
Seed GCACCAC
Precursor
(pre-Mir +30nt flank)		 
ACCUUGUCAGAAGCCACCUUCUGUGCCCCCAGCACCACGUGUCUGGGCCACGUGAGCAACGCCACGUGGGCCUGACGUGGAGCUGGGGCCGCAGGGGUCUGAUGGCCUCCUGUUUC
Get precursor sequence
Structure
        10          20        30        40        50        
ACCUUGUCAGAAGCCAC--|       C       A      GUCU  G      GAGC 
                   CUUCUGUG CCCCAGC CCACGU    GG CCACGU    A
                   GGGGACGC GGGGUCG GGUGCA    CC GGUGCA    A
CUUUGUCCUCCGGUAGUCU^       C       A      GU--  G      CCGC 
    110       100        90        80          70        60
Deep sequencing
Go to detailed chart
CommentThe Drosha cut in the rodents is +3 relative to the primates.
3' NTU No
MotifsNo
Tissue expression
- +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Mature sequence

Rno-Mir-770_5p
mirBase accessionMIMAT0005338
Sequence 
0- AGCACCACGUGUCUGGGCCACGU -23
Get sequence
Proposed targets microrna.org: MIMAT0005338
TargetScanVert: rno-miR-770-5p
miRDB: MIMAT0005338
Star sequence

Rno-Mir-770_3p*
mirBase accessionMIMAT0017317
Sequence 
35- GUGGGCCUGACGUGGAGCUGG -56
Get sequence
Proposed targets TargetScanVert: rno-miR-770-3p
miRDB: MIMAT0017317