MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-770

Family name MIR-770 (all species)
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-770
Paralogues
Orthologues Cja-Mir-770  Eca-Mir-770  Hsa-Mir-770  Mmr-Mir-770  Mmu-Mir-770  Pab-Mir-770  Rno-Mir-770 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014342.1: 163071875-163071936 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-770)
Mir-770 CM014342.1: 163071875-163071936 [+] UCSC Ensembl
Mir-493 CM014342.1: 163089342-163089403 [+] UCSC Ensembl
Mir-337-as CM014342.1: 163094789-163094848 [-] UCSC Ensembl
Mir-337-v2 CM014342.1: 163094791-163094850 [+] UCSC Ensembl
Mir-337-v1 CM014342.1: 163094791-163094850 [+] UCSC Ensembl
Mir-431 CM014342.1: 163101602-163101665 [+] UCSC Ensembl
Mir-433 CM014342.1: 163102473-163102546 [+] UCSC Ensembl
Mir-127 CM014342.1: 163103577-163103632 [+] UCSC Ensembl
Mir-432 CM014342.1: 163105075-163105143 [+] UCSC Ensembl
Mir-136-v2 CM014342.1: 163105295-163105350 [+] UCSC Ensembl
Mir-136-v1 CM014342.1: 163105295-163105350 [+] UCSC Ensembl
Seed CCAGUAC
Precursor
(pre-Mir +30nt flank)
AUUCAUGUGCCAGGAGCCACCUUCCGAGCCUCCAGUACCACGUGUCAGGGCCACAUGAGCUGGGCCUCGUGGGCCUGAUGUGGUGCUGGGGCCUCAGGGGUCUGCUCUUCUCCUCUUUCAGA
Get precursor sequence
Structure
        10           20        30        40        50        60 
AUUCAUGUGCCAGGAGCC---|    CC   C            GU      G    AUGAGC 
                     ACCUU  GAG CUCCAGUACCAC  GUCAGG CCAC      U
                     UGGGG  CUC GGGGUCGUGGUG  UAGUCC GGUG      G
AGACUUUCUCCUCUUCUCGUC^    A-   C            --      G    CUCCGG 
120       110       100         90        80          70
Deep sequencing
Go to detailed chart
CommentThe Drosha cut is -3 relative to the murids and Microcebus.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-770_5p

mirBase accessionMIMAT0006514
Sequence
0- UCCAGUACCACGUGUCAGGGCCACA -25
Get sequence
Proposed targets TargetScanVert: mml-miR-770-5p
Star sequence

Mml-Mir-770_3p*

mirBase accessionNone
Sequence
39- UGGGCCUGAUGUGGUGCUGGGGC -62
Get sequence