MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-770

Family name MIR-770 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Eca-Mir-770  Hsa-Mir-770  Mml-Mir-770  Mmr-Mir-770  Mmu-Mir-770  Pab-Mir-770  Rno-Mir-770 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021924.1: 131654447-131654508 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-770)		 Mir-770 CM021924.1: 131654447-131654508 [+] UCSC Ensembl
Mir-493 CM021924.1: 131672486-131672548 [+] UCSC Ensembl
Mir-337 CM021924.1: 131682138-131682197 [+] UCSC Ensembl
Mir-431 CM021924.1: 131688487-131688550 [+] UCSC Ensembl
Mir-433 CM021924.1: 131689358-131689431 [+] UCSC Ensembl
Mir-127 CM021924.1: 131690462-131690517 [+] UCSC Ensembl
Mir-432 CM021924.1: 131691960-131692028 [+] UCSC Ensembl
Mir-136 CM021924.1: 131692180-131692235 [+] UCSC Ensembl
Seed CCAGUAC
Precursor
(pre-Mir +30nt flank)		 
AUUCAUGUGUCAGGAGCCACCUUCUGAGCCUCCAGUACCAUGUGUCAGGACCACAUGAACUGGGCAUUGUGGGCCUGACAUGGUGCUGGGGCCUCAGGGGUCUGCUCUUCUCCUCUUUCAGA
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Structure
        10           20        30        40        50        60 
AUUCAUGUGUCAGGAGCC---|   U     C           UG       A     UGAAC 
                     ACCU CUGAG CUCCAGUACCA  UGUCAGG CCACA     U
                     UGGG GACUC GGGGUCGUGGU  ACAGUCC GGUGU     G
AGACUUUCUCCUCUUCUCGUC^   -     C           --       G     UACGG 
120       110       100         90          80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Cja-Mir-770_5p (predicted)
mirBase accessionNone
Sequence 
0- UCCAGUACCAUGUGUCAGGACCACA -25
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Star sequence

Cja-Mir-770_3p* (predicted)
mirBase accessionNone
Sequence 
39- UGGGCCUGACAUGGUGCUGGGGC -62
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