MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-431

Family name MIR-431 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-431  Cfa-Mir-431  Cpo-Mir-431  Eca-Mir-431  Ete-Mir-431  Hsa-Mir-431  Laf-Mir-431  Mml-Mir-431  Mmr-Mir-431  Mmu-Mir-431  Ocu-Mir-431  Pab-Mir-431  Rno-Mir-431 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021924.1: 131688487-131688550 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-431)		 Mir-770 CM021924.1: 131654447-131654508 [+] UCSC Ensembl
Mir-493 CM021924.1: 131672486-131672548 [+] UCSC Ensembl
Mir-337 CM021924.1: 131682138-131682197 [+] UCSC Ensembl
Mir-431 CM021924.1: 131688487-131688550 [+] UCSC Ensembl
Mir-433 CM021924.1: 131689358-131689431 [+] UCSC Ensembl
Mir-127 CM021924.1: 131690462-131690517 [+] UCSC Ensembl
Mir-432 CM021924.1: 131691960-131692028 [+] UCSC Ensembl
Mir-136 CM021924.1: 131692180-131692235 [+] UCSC Ensembl
Mir-370 CM021924.1: 131718304-131718360 [+] UCSC Ensembl
Seed GUCUUGC
Precursor
(pre-Mir +30nt flank)		 
GCACGUCGUUGUCCUGCUUGUCCUGCGAGGUGUCUUGCAGGCCGUCAUGCAGGCCACACUGACGGUAACGUUGCAGGUCGUCUUGCAGGGCUUCUCGCAAGACGACAUCCUCAUCGCCAACGAC
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Structure
        10          20        30        40        50        60 
GCACGUCGUUGUCCUGC--|    C       U          C  UCA    GGCCACACU 
                   UUGUC UGCGAGG GUCUUGCAGG CG   UGCA         G
                   AGCAG ACGCUCU CGGGACGUUC GC   ACGU         A
CAGCAACCGCUACUCCUAC^    A       U          U  UGG    UGCAAUGGC 
  120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Cja-Mir-431_5p (predicted)
mirBase accessionNone
Sequence 
0- UGUCUUGCAGGCCGUCAUGCA -21
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Co-mature sequence

Cja-Mir-431_3p (predicted)
mirBase accessionNone
Sequence 
43- CAGGUCGUCUUGCAGGGCUUC -64
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