MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-431

Family name MIR-431 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-431
Paralogues
Orthologues Cfa-Mir-431  Cja-Mir-431  Cpo-Mir-431  Eca-Mir-431  Ete-Mir-431  Hsa-Mir-431  Laf-Mir-431  Mml-Mir-431  Mmr-Mir-431  Mmu-Mir-431  Ocu-Mir-431  Pab-Mir-431  Rno-Mir-431 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037348.1: 65778736-65778799 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-431)		 Mir-493 NC_037348.1: 65766695-65766757 [+] UCSC Ensembl
Mir-431 NC_037348.1: 65778736-65778799 [+] UCSC Ensembl
Mir-433 NC_037348.1: 65779607-65779680 [+] UCSC Ensembl
Mir-127 NC_037348.1: 65780711-65780766 [+] UCSC Ensembl
Mir-432 NC_037348.1: 65782197-65782265 [+] UCSC Ensembl
Mir-136-v1 NC_037348.1: 65782384-65782439 [+] UCSC Ensembl
Mir-136-v2 NC_037348.1: 65782384-65782439 [+] UCSC Ensembl
Mir-370 NC_037348.1: 65808196-65808252 [+] UCSC Ensembl
Seed GUCUUGC
Precursor
(pre-Mir +30nt flank)		 
CCCACACGUCAUCCUGCGCGUCCUGCGAGGUGUCUUGCAGGCCGUCAUGCAGGCCACACUGACGGAAACGUUGCAGGUCGUCUUGCAGGGCUUCUCGCAAGACGACAUAUUCAUCACCCUCGAC
Get precursor sequence
Structure
        10          20        30        40        50        60 
CCCACACGUCAUCCUGCG--|   C       U          C  UCA    GGCCACACU 
                    CGUC UGCGAGG GUCUUGCAGG CG   UGCA         G
                    GCAG ACGCUCU CGGGACGUUC GC   ACGU         A
CAGCUCCCACUACUUAUACA^   A       U          U  UGG    UGCAAAGGC 
  120       110       100        90        80        70
Deep sequencing
Go to detailed chart
CommentThere are Dicer cuts +2 and +3 on the 3p arm.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-431_5p
mirBase accessionMIMAT0009316
Sequence 
0- UGUCUUGCAGGCCGUCAUGCA -21
Get sequence
Proposed targets TargetScanVert: bta-miR-431
Co-mature sequence

Bta-Mir-431_3p
mirBase accessionNone
Sequence 
43- CAGGUCGUCUUGCAGGGCUUC -64
Get sequence