MirGeneDB 2.1

MirGeneDB ID

Rno-Mir-132-P2

Family name MIR-132 (all species)
Seed CCUUGGC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-212
Paralogues Rno-Mir-132-P1 
Orthologues Aca-Mir-132-P2  Ami-Mir-132-P2  Bta-Mir-132-P2  Cfa-Mir-132-P2  Cmi-Mir-132-P2  Cpi-Mir-132-P2  Cpo-Mir-132-P2  Dno-Mir-132-P2  Dre-Mir-132-P2a  Dre-Mir-132-P2b  Gga-Mir-132-P2  Gja-Mir-132-P2  Gmo-Mir-132-P2a  Gmo-Mir-132-P2b  Hsa-Mir-132-P2  Lch-Mir-132-P2  Loc-Mir-132-P2  Mal-Mir-132-P2a  Mal-Mir-132-P2b  Mdo-Mir-132-P2  Mml-Mir-132-P2  Mmu-Mir-132-P2  Mun-Mir-132-P2  Oan-Mir-132-P2  Ocu-Mir-132-P2  Pbv-Mir-132-P2  Pma-Mir-132-o2  Sha-Mir-132-P2  Spt-Mir-132-P2  Tgu-Mir-132-P2  Tni-Mir-132-P2a  Tni-Mir-132-P2b  Xla-Mir-132-P2c  Xla-Mir-132-P2d  Xtr-Mir-132-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(rn6)
chr10: 62014733-62014794 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-132-P2)
Mir-132-P2 chr10: 62014733-62014794 [+] UCSC Ensembl
Mir-132-P1 chr10: 62015017-62015074 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGAUAUCCCCGCCCGGGCAGCGCGCCGGCACCUUGGCUCUAGACUGCUUACUGCCCGGGCCGCCCUCAGUAACAGUCUCCAGUCACGGCCACCGACGCCUGGCCCCGCCCCAGGACCGCCG
Get precursor sequence
Structure
        10          20        30         40        50        60 
GGGAUAUCCCCGCCCGGG--|  C   C   CA-  U     CU      C     GCCCGGG 
                    CAG GCG CGG   CC UGGCU  AGACUG UUACU       \
                    GUC CGC GCC   GG ACUGA  UCUGAC AAUGA       C
GCCGCCAGGACCCCGCCCCG^  -   A   ACC  C     CC      -     CUCCCGC 
120       110       100         90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Mature sequence

Rno-Mir-132-P2_5p

mirBase accessionMIMAT0017158
Sequence
0- ACCUUGGCUCUAGACUGCUUACU -23
Get sequence
Proposed targets TargetScanVert: rno-miR-212-5p
miRDB: MIMAT0017158
Co-mature sequence

Rno-Mir-132-P2_3p

mirBase accessionMIMAT0000883
Sequence
40- UAACAGUCUCCAGUCACGGCCA -62
Get sequence
Proposed targets microrna.org: MIMAT0000883
TargetScanVert: rno-miR-212-3p
miRDB: MIMAT0000883