| MirGeneDB ID | Tgu-Mir-132-P2 |
|---|
| Family name |
MIR-132 (all species) |
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| Seed |
CCUUGGC |
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| Species |
Zebra finch (Taeniopygia guttata) |
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| MiRBase ID |
|
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| Paralogues |
Tgu-Mir-132-P1
|
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| Orthologues |
Aca-Mir-132-P2
Ami-Mir-132-P2
Bta-Mir-132-P2
Cfa-Mir-132-P2
Cmi-Mir-132-P2
Cpi-Mir-132-P2
Cpo-Mir-132-P2
Dno-Mir-132-P2
Dre-Mir-132-P2a
Dre-Mir-132-P2b
Gga-Mir-132-P2
Gja-Mir-132-P2
Gmo-Mir-132-P2a
Gmo-Mir-132-P2b
Hsa-Mir-132-P2
Lch-Mir-132-P2
Loc-Mir-132-P2
Mal-Mir-132-P2a
Mal-Mir-132-P2b
Mdo-Mir-132-P2
Mml-Mir-132-P2
Mmu-Mir-132-P2
Mun-Mir-132-P2
Oan-Mir-132-P2
Ocu-Mir-132-P2
Pbv-Mir-132-P2
Pma-Mir-132-o2
Rno-Mir-132-P2
Sha-Mir-132-P2
Spt-Mir-132-P2
Tni-Mir-132-P2a
Tni-Mir-132-P2b
Xla-Mir-132-P2c
Xla-Mir-132-P2d
Xtr-Mir-132-P2
|
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| Node of Origin (locus) |
Vertebrata
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(TaeGut1_add) |
19: 4631758-4631822 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GUCGAGGAGAGCCCGAGUCAGAGCGUCGGCACCUUGGCUCUAGACUGCUUACUGCUGCGUAGGGACAGGACAGUAACAGUCUACAGUCAUGGCUACUGAAGCAUGACCCACCGCCGGCACCGGCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GUCGAGGAGAGCCCGAG--| GA G CA- U C C GCUGCGUA
UCA GC UCGG CC UGGCU UAGACUG UUACU G
AGU CG AGUC GG ACUGA AUCUGAC AAUGA G
ACGGCCACGGCCGCCACCC^ A- A AUC U C - CAGGACAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Tgu-Mir-132-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACCUUGGCUCUAGACUGCUUACU -23
Get sequence
|
|---|
| Star sequence |
Tgu-Mir-132-P2_3p* |
| mirBase accession | None |
|---|
| Sequence |
43- UAACAGUCUACAGUCAUGGCUA -65
Get sequence
|
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