MirGeneDB 2.1

MirGeneDB ID

Dre-Mir-132-P2b

Family name MIR-132 (all species)
Seed CCUUGGC
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-212-2
Paralogues Dre-Mir-132-P1a  Dre-Mir-132-P1b  Dre-Mir-132-P2a 
Orthologues Aca-Mir-132-P2  Ami-Mir-132-P2  Bta-Mir-132-P2  Cfa-Mir-132-P2  Cmi-Mir-132-P2  Cpi-Mir-132-P2  Cpo-Mir-132-P2  Dno-Mir-132-P2  Gga-Mir-132-P2  Gja-Mir-132-P2  Gmo-Mir-132-P2b  Hsa-Mir-132-P2  Lch-Mir-132-P2  Loc-Mir-132-P2  Mal-Mir-132-P2b  Mdo-Mir-132-P2  Mml-Mir-132-P2  Mmu-Mir-132-P2  Mun-Mir-132-P2  Oan-Mir-132-P2  Ocu-Mir-132-P2  Pbv-Mir-132-P2  Pma-Mir-132-o2  Rno-Mir-132-P2  Sha-Mir-132-P2  Spt-Mir-132-P2  Tgu-Mir-132-P2  Tni-Mir-132-P2b  Xtr-Mir-132-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Vertebrata
Genome context
(danRer11)
chr10: 35644719-35644787 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-132-P2b)
Mir-132-P2b chr10: 35644719-35644787 [+] UCSC Ensembl
Mir-132-P1b chr10: 35645043-35645103 [+] UCSC Ensembl
Mir-2184-P1a chr10: 35654276-35654332 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGUCUUUUCAAGCAUGUCAGAACUUCAUGACCUUGGCUCUAGACUGCUUACUGCUUAUGGAGUCCGACAGUACAGUAACAGUCUACAGUCAUGGCUACUGAAGUCUGGCUCCAGCAUCACACACUAAU
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Structure
        10           20         30        40        50        60    
GAGUCUUUUCAAGCAUG---|    A     -  A  U     C       C     GCUUAUGGAG 
                    UCAGA CUUCA UG CC UGGCU UAGACUG UUACU          \
                    GGUCU GAAGU AU GG ACUGA AUCUGAC AAUGA          U
UAAUCACACACUACGACCUC^    -     C  C  U     C       -     CAUGACAGCC 
       120       110        100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-132-P2b_5p

mirBase accessionMIMAT0048650
Sequence
0- ACCUUGGCUCUAGACUGCUUACU -23
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Co-mature sequence

Dre-Mir-132-P2b_3p

mirBase accessionMIMAT0048651
Sequence
46- UAACAGUCUACAGUCAUGGCUAC -69
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