MirGeneDB 2.1

MirGeneDB ID

Spt-Mir-132-P2

Family name MIR-132 (all species)
Seed CCUUGGC
Species Tuatara (Sphenodon punctatus)
MiRBase ID
Paralogues Spt-Mir-132-P1 
Orthologues Aca-Mir-132-P2  Ami-Mir-132-P2  Bta-Mir-132-P2  Cfa-Mir-132-P2  Cmi-Mir-132-P2  Cpi-Mir-132-P2  Cpo-Mir-132-P2  Dno-Mir-132-P2  Dre-Mir-132-P2a  Dre-Mir-132-P2b  Gga-Mir-132-P2  Gja-Mir-132-P2  Gmo-Mir-132-P2a  Gmo-Mir-132-P2b  Hsa-Mir-132-P2  Lch-Mir-132-P2  Loc-Mir-132-P2  Mal-Mir-132-P2a  Mal-Mir-132-P2b  Mdo-Mir-132-P2  Mml-Mir-132-P2  Mmu-Mir-132-P2  Mun-Mir-132-P2  Oan-Mir-132-P2  Ocu-Mir-132-P2  Pbv-Mir-132-P2  Pma-Mir-132-o2  Rno-Mir-132-P2  Sha-Mir-132-P2  Tgu-Mir-132-P2  Tni-Mir-132-P2a  Tni-Mir-132-P2b  Xla-Mir-132-P2c  Xla-Mir-132-P2d  Xtr-Mir-132-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003113815.1_ASM311381v1_TUATARA)
QEPC01008384.1: 3145928-3145995 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUGAGAAGACCCCAAGUCAGUGCAUCGGCACCUUGGCUCUAGACUGCUUACUGCUACGAAGCAUUAAGGAAACAGUAACAGUCUACAGUCAUGGCUACUGAAGCAUGACAGGUACAGCGUCUGCGCC
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Structure
        10          20        30         40        50        60    
GGUGAGAAGACCCCAAG--|  G   A    CA-  U     C       C     GCUACGAAGC 
                   UCA UGC UCGG   CC UGGCU UAGACUG UUACU          \
                   AGU ACG AGUC   GG ACUGA AUCUGAC AAUGA          A
CCGCGUCUGCGACAUGGAC^  -   A    AUC  U     C       -     CAAAGGAAUU 
      120       110        100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Mature sequence

Spt-Mir-132-P2_5p (predicted)

mirBase accessionNone
Sequence
0- ACCUUGGCUCUAGACUGCUUACU -23
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Co-mature sequence

Spt-Mir-132-P2_3p (predicted)

mirBase accessionNone
Sequence
46- UAACAGUCUACAGUCAUGGCUA -68
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