MirGeneDB 2.1

MirGeneDB ID

Cpi-Mir-132-P2

Family name MIR-132 (all species)
Seed CCUUGGC
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-212
Paralogues Cpi-Mir-132-P1 
Orthologues Aca-Mir-132-P2  Ami-Mir-132-P2  Bta-Mir-132-P2  Cfa-Mir-132-P2  Cmi-Mir-132-P2  Cpo-Mir-132-P2  Dno-Mir-132-P2  Dre-Mir-132-P2a  Dre-Mir-132-P2b  Gga-Mir-132-P2  Gja-Mir-132-P2  Gmo-Mir-132-P2a  Gmo-Mir-132-P2b  Hsa-Mir-132-P2  Lch-Mir-132-P2  Loc-Mir-132-P2  Mal-Mir-132-P2a  Mal-Mir-132-P2b  Mdo-Mir-132-P2  Mml-Mir-132-P2  Mmu-Mir-132-P2  Mun-Mir-132-P2  Oan-Mir-132-P2  Ocu-Mir-132-P2  Pbv-Mir-132-P2  Pma-Mir-132-o2  Rno-Mir-132-P2  Sha-Mir-132-P2  Spt-Mir-132-P2  Tgu-Mir-132-P2  Tni-Mir-132-P2a  Tni-Mir-132-P2b  Xla-Mir-132-P2c  Xla-Mir-132-P2d  Xtr-Mir-132-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(chrPic1)
JH585539: 25130-25197 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-132-P2)
Mir-2184 JH585539: 17052-17110 [+] UCSC Ensembl
Mir-132-P1 JH585539: 18764-18822 [-] UCSC Ensembl
Mir-132-P2 JH585539: 25130-25197 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUGAGAAGAUCCCAAGUCAGCGCGUCGGCACCUUGGCUCUAGACUGAUUACUGCUAAGUAGCAUUAAAGAAACAGUAACAGUCUACAGUCAUGGCUACUGAAGCAUGACAGCUACAGCGCCUGCACC
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Structure
        10          20        30         40        50        60    
GGUGAGAAGAUCCCAAG--|  GC  G    CA-  U     C       A     GCUAAGUAGC 
                   UCA  GC UCGG   CC UGGCU UAGACUG UUACU          \
                   AGU  CG AGUC   GG ACUGA AUCUGAC AAUGA          A
CCACGUCCGCGACAUCGAC^  A-  A    AUC  U     C       -     CAAAGAAAUU 
      120       110        100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Te Te Te To
Mature sequence

Cpi-Mir-132-P2_5p

mirBase accessionMIMAT0037838
Sequence
0- ACCUUGGCUCUAGACUGAUUACU -23
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Star sequence

Cpi-Mir-132-P2_3p*

mirBase accessionNone
Sequence
46- UAACAGUCUACAGUCAUGGCUA -68
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