| MirGeneDB ID | Xla-Mir-132-P2c |
|---|
| Family name |
MIR-132 (all species) |
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| Seed |
CCUUGGC |
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| Species |
African clawed frog (Xenopus laevis) |
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| MiRBase ID |
xla-mir-212
|
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| Paralogues |
Xla-Mir-132-P1c
Xla-Mir-132-P1d
Xla-Mir-132-P2d
|
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| Orthologues |
Aca-Mir-132-P2
Ami-Mir-132-P2
Bta-Mir-132-P2
Cfa-Mir-132-P2
Cmi-Mir-132-P2
Cpi-Mir-132-P2
Cpo-Mir-132-P2
Dno-Mir-132-P2
Gga-Mir-132-P2
Gja-Mir-132-P2
Hsa-Mir-132-P2
Lch-Mir-132-P2
Loc-Mir-132-P2
Mdo-Mir-132-P2
Mml-Mir-132-P2
Mmu-Mir-132-P2
Mun-Mir-132-P2
Oan-Mir-132-P2
Ocu-Mir-132-P2
Pbv-Mir-132-P2
Pma-Mir-132-o2
Rno-Mir-132-P2
Sha-Mir-132-P2
Spt-Mir-132-P2
Tgu-Mir-132-P2
Xtr-Mir-132-P2
|
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| Node of Origin (locus) |
X. laevis
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(GCF_001663975.1_XLA_v2) |
NC_030726.1: 34145577-34145645 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UGAUGCUCACCUAAUGGUCAUUGCAUCGGCACCUUGGCUCUAGACUGCUUACUGUGAAACUGUGCUAUAGGAACAGUAACAGUCUACAGUCAUGGCUACUGACGUAUGACUGCUACUUCUGUACAGCCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UGAUGCUCACCUAAUGG---| U A CA- U C C GUGAAACUGU
UCAU GC UCGG CC UGGCU UAGACUG UUACU \
AGUA UG AGUC GG ACUGA AUCUGAC AAUGA G
ACCGACAUGUCUUCAUCGUC^ - C AUC U C - CAAGGAUAUC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Xla-Mir-132-P2c_5p |
| mirBase accession | MIMAT0046532 |
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| Sequence |
0- ACCUUGGCUCUAGACUGCUUACU -23
Get sequence
|
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| Star sequence |
Xla-Mir-132-P2c_3p* |
| mirBase accession | MIMAT0046533 |
|---|
| Sequence |
46- UAACAGUCUACAGUCAUGGCUAC -69
Get sequence
|
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