MirGeneDB 2.1

MirGeneDB ID

Ocu-Mir-132-P2

Family name MIR-132 (all species)
Seed CCUUGGC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-212
Paralogues Ocu-Mir-132-P1 
Orthologues Aca-Mir-132-P2  Ami-Mir-132-P2  Bta-Mir-132-P2  Cfa-Mir-132-P2  Cmi-Mir-132-P2  Cpi-Mir-132-P2  Cpo-Mir-132-P2  Dno-Mir-132-P2  Dre-Mir-132-P2a  Dre-Mir-132-P2b  Gga-Mir-132-P2  Gja-Mir-132-P2  Gmo-Mir-132-P2a  Gmo-Mir-132-P2b  Hsa-Mir-132-P2  Lch-Mir-132-P2  Loc-Mir-132-P2  Mal-Mir-132-P2a  Mal-Mir-132-P2b  Mdo-Mir-132-P2  Mml-Mir-132-P2  Mmu-Mir-132-P2  Mun-Mir-132-P2  Oan-Mir-132-P2  Pbv-Mir-132-P2  Pma-Mir-132-o2  Rno-Mir-132-P2  Sha-Mir-132-P2  Spt-Mir-132-P2  Tgu-Mir-132-P2  Tni-Mir-132-P2a  Tni-Mir-132-P2b  Xla-Mir-132-P2c  Xla-Mir-132-P2d  Xtr-Mir-132-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(oryCun2_add)
chr19: 16131718-16131779 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGGCACCCCCGCCUGGGCAGAGCGCCGGCACCUUGGCUCUAGACUGCUUACUGCCCGGGCCGCCCUCAGUAACAGUCUCCAGUCACGGCCACCGACGCCUGGCCCCGCCCCAGGACCUCCG
Get precursor sequence
Structure
        10          20        30         40        50        60 
GGGGCACCCCCGCCUGGG--|  A   C   CA-  U     CU      C     GCCCGGG 
                    CAG GCG CGG   CC UGGCU  AGACUG UUACU       \
                    GUC CGC GCC   GG ACUGA  UCUGAC AAUGA       C
GCCUCCAGGACCCCGCCCCG^  -   A   ACC  C     CC      -     CUCCCGC 
120       110       100         90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-132-P2_5p

mirBase accessionMIMAT0048335
Sequence
0- ACCUUGGCUCUAGACUGCUUACU -23
Get sequence
Co-mature sequence

Ocu-Mir-132-P2_3p

mirBase accessionMIMAT0048336
Sequence
40- UAACAGUCUCCAGUCACGGCCA -62
Get sequence