MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-3068

Family name MIR-3068 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-3068
Paralogues
Orthologues Mmu-Mir-3068 
Node of Origin (locus) Muridae
Node of Origin (family) Muridae
Genome context
(rn6)		 chr6: 111468737-111468799 [-] UCSC Ensembl
Seed UGGAGUU
Precursor
(pre-Mir +30nt flank)		 
AAGCAAGGGGGACAGCGUAUGCAAGAGUAAUUGGAGUUCAUGCAAGUUCUAACCAGUUUAACCAGUAGCUGGGUGAAUUGCAGUACUCCAACAUUCUGCUUCUAUCCUCUUACAGUUCCCAUG
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Structure
        10        20            30        40        50        60  
AAGCAAGGGGGACAGCGUAU----|  A    AA       UCA     G   UAA  AGUUUAA 
                        GCA GAGU  UUGGAGU   UGCAA UUC   CC       C
                        CGU CUUA  AACCUCA   ACGUU AAG   GG       C
GUACCCUUGACAUUCUCCUAUCUU^  -    C-       UG-     -   UG-  UCGAUGA 
 120       110       100          90         80          70
Deep sequencing
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CommentThere are Dicer cuts on the 3p arm -1 and -2 relative to what is annoated here.
3' NTU No
MotifsNo
Tissue expression
- +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Mature sequence

Rno-Mir-3068_5p
mirBase accessionMIMAT0024845
Sequence 
0- UUGGAGUUCAUGCAAGUUCUAACC -24
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Proposed targets TargetScanVert: rno-miR-3068-5p
miRDB: MIMAT0024845
Co-mature sequence

Rno-Mir-3068_3p
mirBase accessionMIMAT0024846
Sequence 
41- GGUGAAUUGCAGUACUCCAACA -63
Get sequence
Proposed targets TargetScanVert: rno-miR-3068-3p
miRDB: MIMAT0024846