MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-187

Family name MIR-187 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-187
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cja-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Dre-Mir-187  Eca-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Laf-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmr-Mir-187  Mmu-Mir-187  Mun-Mir-187  Neu-Mir-187  Oan-Mir-187  Ocu-Mir-187  Pab-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(rn6)		 chr18: 16390524-16390581 [-] UCSC Ensembl
Seed CGUGUCU
Precursor
(pre-Mir +30nt flank)		 
UGGGCUCACAGGACACAAUGCGGAUCCUCAGGCUACAACACAGGACCCGGGCGCUGCUCUGACCCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCAGGUCUGCAGCAGAGCCUGCCU
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Structure
        10           20        30        40        50        
UGGGCUCACAGGACACAA---|   GA     A    A           C    CGCUGC 
                     UGCG  UCCUC GGCU CAACACAGGAC CGGG      U
                     ACGC  GGGAG CCGA GUUGUGUUCUG GCUC      C
UCCGUCCGAGACGACGUCUGG^   A-     G    C           U    CCCAGU 
      110       100         90        80        70        60
Deep sequencing
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CommentThere are Drosha cuts +1 and -1 on the 5p arm. The 3' end of the 3p arm is also likely monoadenylated when not monouridylated despite the templated adenosine.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Star sequence

Rno-Mir-187_5p*
mirBase accessionMIMAT0017144
Sequence 
0- GGCUACAACACAGGACCCGGGC -22
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Proposed targets TargetScanVert: rno-miR-187-5p
miRDB: MIMAT0017144
Mature sequence

Rno-Mir-187_3p
mirBase accessionMIMAT0000864
Sequence 
36- UCGUGUCUUGUGUUGCAGCCGG -58
Get sequence
Proposed targets microrna.org: MIMAT0000864
TargetScanVert: rno-miR-187-3p
miRDB: MIMAT0000864