MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-187

Family name MIR-187 (all species)
Seed CGUGUCU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-187
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Dre-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mmu-Mir-187  Mun-Mir-187  Oan-Mir-187  Ocu-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(rheMac8_trace)
chr18: 24590844-24590902 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGGCUCACUAUGACACAGUGUGAGACCUCGGGCUACAACACAGGACCCGGGUGCUGCUCUGACCCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCAGGUCCGCAGCAGAGCCUGUUC
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Structure
        10          20        30        40        50         
CAGGCUCACUAUGACACAG--|   AGA    G    A           C    UGCUGC 
                     UGUG   CCUC GGCU CAACACAGGAC CGGG      U
                     ACGC   GGAG CCGA GUUGUGUUCUG GCUC      C
CUUGUCCGAGACGACGCCUGG^   AG-    G    C           U    CCCAGU 
       110       100         90        80        70        60
Deep sequencing
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CommentThere is a second Drosha cut +1 on the 5p arm. The 3' end of the 3p arm is also likely monoadenylated when not monouridylated despite the templated adenosine.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-187_5p*

mirBase accessionMIMAT0026833
Sequence
0- GGGCUACAACACAGGACCCGGGU -23
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Proposed targets TargetScanVert: mml-miR-187-5p
Mature sequence

Mml-Mir-187_3p

mirBase accessionMIMAT0006221
Sequence
37- UCGUGUCUUGUGUUGCAGCCGG -59
Get sequence
Proposed targets TargetScanVert: mml-miR-187-3p