MirGeneDB 2.1
MirGeneDB ID

Mal-Mir-187

Family name MIR-187 (all species)
Seed CGUGUCU
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Dre-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Lch-Mir-187  Loc-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmu-Mir-187  Mun-Mir-187  Oan-Mir-187  Ocu-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884770.1: 1548538-1548599 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
NNNNNNNNNNNNNNNNNNNNNNGGGCCAGGGGCUGCAACACAGGACAUGGGUCCUGCCUCUCCUCCCCGCUCGUGUCUUGUGUUGCAGCCAGUGGAGCUGCCUGUCUCCCUGUCAGUCUGUC
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Structure
        10        20             30        40        50        60
NNNNNNNNNNNNNNNNNNNNNN    -----| GG                      CCUGCCU 
                      GGGC     CA  GGCUGCAACACAGGACAUGGGU       C
                      UCCG     GU  CCGACGUUGUGUUCUGUGCUCG       U
CUGUCUGACUGUCCCUCUG---    UCGAG^ GA                      CCCCUCC 
120       110          100        90        80        70
Deep sequencing
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CommentThe 3' end of the 3p arm is also monouridylated when not monoadenylated despite the templated uridine.
3' NTU Yes
MotifsNo
Tissue expression
-   +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-187_5p*
mirBase accessionNone
Sequence 
0- GGCUGCAACACAGGACAUGGGU -22
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Mature sequence

Mal-Mir-187_3p
mirBase accessionNone
Sequence 
40- UCGUGUCUUGUGUUGCAGCCAG -62
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