MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-187

Family name MIR-187 (all species)
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-187
Paralogues
Orthologues Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cja-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Dre-Mir-187  Eca-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Laf-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmr-Mir-187  Mmu-Mir-187  Mun-Mir-187  Neu-Mir-187  Oan-Mir-187  Ocu-Mir-187  Pab-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(anoCar2)		 6: 57644275-57644332 [-] UCSC Ensembl
Seed CGUGUCU
Precursor
(pre-Mir +30nt flank)		 
AACUUUUUUAUGAAUUCUUGUGAGACCUUUGGCUACAACACAGAACAUGGGCGCUUUCUUGGACCCUCGUGUCUUGUGUUGCAGCCAGAGGGGCACAUCUUGGCAGCAGGACAUCCAA
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Structure
        10           20        30        40        50        
AACUUUUUUAUGAAUUCU---|   AGA         A       GA       CGCUUU 
                     UGUG   CCUUUGGCU CAACACA  ACAUGGG      C
                     ACAC   GGAGACCGA GUUGUGU  UGUGCUC      U
AACCUACAGGACGACGGUUCU^   GG-         C       UC       CCAGGU 
      110       100         90        80        70        60
Deep sequencing
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CommentThere is a second Drosha cut +1 on the 5p arm. The 3' end of the 3p arm is monoadenylated.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Sk Ta Ta To Wh
Star sequence

Aca-Mir-187_5p*
mirBase accessionMIMAT0021815
Sequence 
0- GGCUACAACACAGAACAUGGGC -22
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Mature sequence

Aca-Mir-187_3p
mirBase accessionMIMAT0021816
Sequence 
36- UCGUGUCUUGUGUUGCAGCCAG -58
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