MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-187

Family name MIR-187 (all species)
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-187
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cja-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Dre-Mir-187  Eca-Mir-187  Ete-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Laf-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmr-Mir-187  Mmu-Mir-187  Mun-Mir-187  Neu-Mir-187  Oan-Mir-187  Ocu-Mir-187  Pab-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(Gallus_gallus.GRCg6a)		 2: 83611957-83612014 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-187)		 Mir-187 2: 83611957-83612014 [+] UCSC Ensembl
Mir-1677-P6 2: 83618413-83618470 [+] UCSC Ensembl
Seed CGUGUCU
Precursor
(pre-Mir +30nt flank)		 
GGGUUUGCUCUAAACUAUUGUGAGACCUCCGGCUACAACACAGGACAUGGGAGCUUUUCUGAACCCUCGUGUCUUGUGUUGCAGCCAGAGGGGCACAUCUUUUCAACAGAGUCUGAGA
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Structure
        10           20        30        40        50        
GGGUUUGCUCUAAACUAU---|   AGA    C    A                AGCUUU 
                     UGUG   CCUC GGCU CAACACAGGACAUGGG      U
                     ACAC   GGAG CCGA GUUGUGUUCUGUGCUC      C
AGAGUCUGAGACAACUUUUCU^   GG-    A    C                CCAAGU 
      110       100         90        80        70        60
Deep sequencing
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CommentThere is a second Drosha cut +1 on the 5p arm. The 3' end of the 3p arm is also likely monoadenylated when not monouridylated despite the templated adenosine.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-187_5p*
mirBase accessionMIMAT0026507
Sequence 
0- GGCUACAACACAGGACAUGGGA -22
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Proposed targets TargetScanVert: gga-miR-187-5p
miRDB: MIMAT0026507
Mature sequence

Gga-Mir-187_3p
mirBase accessionMIMAT0001124
Sequence 
36- UCGUGUCUUGUGUUGCAGCCAG -58
Get sequence
Proposed targets TargetScanVert: gga-miR-187-3p
miRDB: MIMAT0001124