MirGeneDB 3.0

MirGeneDB ID

Rno-Mir-674

Family name MIR-674 (all species)
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-674
Paralogues
Orthologues Mmu-Mir-674 
Node of Origin (locus) Muridae
Node of Origin (family) Muridae
Genome context
(rn6)
chr3: 108864472-108864528 [+] UCSC Ensembl
Seed ACAGCUC
Precursor
(pre-Mir +30nt flank)
CCAGUUGGCCUAGUCCUCACCCUGAGCCUUGCACUGAGAUGGGAGUGGUGUAAGGCUCAGGUAUGCACAGCUCCCAUCUCAGAACAAGGCUCGGGUGUGCACAGCUCCCAUCAGUAC
Get precursor sequence
Structure
        10         20         30        40        50        
CCAGUUGGCCUAGUCCU-   -|          CA             G     AGGCU 
                  CAC CCUGAGCCUUG  CUGAGAUGGGAGU GUGUA     \
                  GUG GGGCUCGGAAC  GACUCUACCCUCG CACGU     C
CAUGACUACCCUCGACAC   U^          AA             A     AUGGA 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
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Star sequence

Rno-Mir-674_5p*

mirBase accessionMIMAT0005329
Sequence
0- GCACUGAGAUGGGAGUGGUGUA -22
Get sequence
Proposed targets microrna.org: MIMAT0005329
TargetScanVert: rno-miR-674-5p
miRDB: MIMAT0005329
Mature sequence

Rno-Mir-674_3p

mirBase accessionMIMAT0005330
Sequence
35- CACAGCUCCCAUCUCAGAACAA -57
Get sequence
Proposed targets microrna.org: MIMAT0005330
TargetScanVert: rno-miR-674-3p
miRDB: MIMAT0005330