MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-430-P4

Family name MIR-430 (all species)
Seed AAGUGCU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-302d
Paralogues Mdo-Mir-430-P1  Mdo-Mir-430-P2  Mdo-Mir-430-P3  Mdo-Mir-430-P51  Mdo-Mir-430-P52 
Orthologues Ami-Mir-430-P4  Bta-Mir-430-P4  Cfa-Mir-430-P4  Cli-Mir-430-P4  Cmi-Mir-430-P4  Cpi-Mir-430-P4  Cpo-Mir-430-P4  Dno-Mir-430-P4  Ete-Mir-430-P4  Gga-Mir-430-P4  Hsa-Mir-430-P4  Mml-Mir-430-P4  Mmu-Mir-430-P4  Oan-Mir-430-P4  Ocu-Mir-430-P4  Rno-Mir-430-P4  Spt-Mir-430-P4  Sto-Mir-430-P4  Tgu-Mir-430-P4  Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xtr-Mir-430-o4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)
5: 66074491-66074551 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P4)
Mir-92-P2a 5: 66074340-66074399 [-] UCSC Ensembl
Mir-430-P4 5: 66074491-66074551 [-] UCSC Ensembl
Mir-430-P3 5: 66074652-66074712 [-] UCSC Ensembl
Mir-430-P2 5: 66074864-66074922 [-] UCSC Ensembl
Mir-430-P1 5: 66075012-66075070 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAAAUGGACUCAAUUUUAAGGAUCUCCUCUGCUUUAACAUGGAAGUGCUUGCUGUGAUUUUAAAAAAUUAAGUGCUUCCAUGUUUGAGUUGUGGUGAUUCCUAAAGGCAUAUAAAAGAUUU
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Structure
        10         20         30        40        50          
UAAAUGGACUCAAUUUUA-   -|  U  UCU    U          UG    CUGUGAUU 
                   AGG AUC CC   GCUU AACAUGGAAG  CUUG        \
                   UCC UAG GG   UGAG UUGUACCUUC  GAAU        U
UUUAGAAAAUAUACGGAAA   U^  U  UGU    U          GU    UAAAAAAU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-430-P4_5p* (predicted)

mirBase accessionNone
Sequence
0- GCUUUAACAUGGAAGUGCUUGCU -23
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Mature sequence

Mdo-Mir-430-P4_3p (predicted)

mirBase accessionMIMAT0004183
Sequence
38- UAAGUGCUUCCAUGUUUGAGUUG -61
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Proposed targets TargetScanVert: mdo-miR-302d