| MirGeneDB ID | Spt-Mir-430-P2 |
|---|---|
| Family name | MIR-430 (all species) |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | Spt-Mir-430-P1 Spt-Mir-430-P3 Spt-Mir-430-P4 |
| Orthologues | Ami-Mir-430-P2 Bta-Mir-430-P2 Cfa-Mir-430-P2 Cja-Mir-430-P2 Cli-Mir-430-P2 Cmi-Mir-430-P2 Cpi-Mir-430-P2 Cpo-Mir-430-P2 Dno-Mir-430-P2 Dre-Mir-430-o2a1 Dre-Mir-430-o2a2 Dre-Mir-430-o2a3 Dre-Mir-430-o2a4 Dre-Mir-430-o2a5 Dre-Mir-430-o2a6 Dre-Mir-430-o2a7 Dre-Mir-430-o2a8 Dre-Mir-430-o2a9 Dre-Mir-430-o2a10 Dre-Mir-430-o2a11 Dre-Mir-430-o2a12 Dre-Mir-430-o2a13 Dre-Mir-430-o2a14 Dre-Mir-430-o2b Dre-Mir-430-o2c1 Dre-Mir-430-o2c2 Dre-Mir-430-o2c3 Dre-Mir-430-o2d1 Dre-Mir-430-o2d2 Eca-Mir-430-P2 Ete-Mir-430-P2 Gga-Mir-430-P2 Hsa-Mir-430-P2 Laf-Mir-430-P2 Mdo-Mir-430-P2 Mml-Mir-430-P2 Mmr-Mir-430-P2 Mmu-Mir-430-P2 Neu-Mir-430-P2 Oan-Mir-430-P2 Ocu-Mir-430-P2 Pab-Mir-430-P2 Sha-Mir-430-P2 Sto-Mir-430-P2 Tgu-Mir-430-P2 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01012655.1: 3307379-3307436 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-430-P2) |
Mir-430-P1
QEPC01012655.1: 3307136-3307196 [+]
UCSC
Ensembl
Mir-430-P2 QEPC01012655.1: 3307379-3307436 [+] UCSC Ensembl Mir-430-P3 QEPC01012655.1: 3307625-3307688 [+] UCSC Ensembl Mir-430-P4 QEPC01012655.1: 3307778-3307837 [+] UCSC Ensembl Mir-92-P2a QEPC01012655.1: 3308100-3308159 [+] UCSC Ensembl |
| Seed | AAGUGCU |
| Precursor (pre-Mir +30nt flank) |
AUGCAUGACAAUUUUUCAAGGAUCCCUGUUGCUUUAACAUGGAUGUACCUGCUGUACAAAGAAAGUAAGUGCUUCCAUGUUUCAGUGGUGGUGAACCUAUUUGGGUGAUGAUCUACAUGet precursor sequence |
| Structure | 10 20 30 40 50 AUGCAUGACAAUUUUUCA--| A C UG UG UU U C GUAC AGG UC C U CU AACAUGGA GUAC UGCU A UCC AG G G GA UUGUACCU CGUG AUGA A UACAUCUAGUAGUGGGUUUA^ A U GU GU CU U A AAGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Spt-Mir-430-P2_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GCUUUAACAUGGAUGUACCUGCU -23
Get sequence
|
| Mature sequence | Spt-Mir-430-P2_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- UAAGUGCUUCCAUGUUUCAGUGG -58
Get sequence
|
