MirGeneDB 2.1

MirGeneDB ID

Gga-Mir-430-P2

Family name MIR-430 (all species)
Seed AAGUGCU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-302c
Paralogues Gga-Mir-430-P1  Gga-Mir-430-P3  Gga-Mir-430-P4 
Orthologues Ami-Mir-430-P2  Bta-Mir-430-P2  Cfa-Mir-430-P2  Cli-Mir-430-P2  Cmi-Mir-430-P2  Cpi-Mir-430-P2  Cpo-Mir-430-P2  Dno-Mir-430-P2  Dre-Mir-430-o2a1  Dre-Mir-430-o2a2  Dre-Mir-430-o2a3  Dre-Mir-430-o2a4  Dre-Mir-430-o2a5  Dre-Mir-430-o2a6  Dre-Mir-430-o2a7  Dre-Mir-430-o2a8  Dre-Mir-430-o2a9  Dre-Mir-430-o2a10  Dre-Mir-430-o2a11  Dre-Mir-430-o2a12  Dre-Mir-430-o2a13  Dre-Mir-430-o2a14  Dre-Mir-430-o2b  Dre-Mir-430-o2c1  Dre-Mir-430-o2c2  Dre-Mir-430-o2c3  Dre-Mir-430-o2d1  Dre-Mir-430-o2d2  Ete-Mir-430-P2  Hsa-Mir-430-P2  Mdo-Mir-430-P2  Mml-Mir-430-P2  Mmu-Mir-430-P2  Oan-Mir-430-P2  Ocu-Mir-430-P2  Sha-Mir-430-P2  Spt-Mir-430-P2  Sto-Mir-430-P2  Tgu-Mir-430-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)
4: 57084446-57084502 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P2)
Mir-430-P1 4: 57084186-57084246 [+] UCSC Ensembl
Mir-430-P2 4: 57084446-57084502 [+] UCSC Ensembl
Mir-430-P3 4: 57084749-57084807 [+] UCSC Ensembl
Mir-430-P4 4: 57085084-57085144 [+] UCSC Ensembl
Mir-92-P2a 4: 57085223-57085282 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUCAGAAGGAUUUUCAAAGGACUUCCUCCGCUUUAACAUGGAGGUACCUGCUGCCUACAAAAGUAAGUGCUUCCAUGUUUCAGUGGUGGUGGAUCCUAAUGUCUGAAACAUUUUUC
Get precursor sequence
Structure
        10         20         30        40        50        
GUUCAGAAGGAUUUUCAA-    -| U  U     UU             C    GCCU 
                   AGGA CU CC CCGCU  AACAUGGAGGUAC UGCU    \
                   UCCU GG GG GGUGA  UUGUACCUUCGUG AUGA    A
CUUUUUACAAAGUCUGUAA    A^ U  U     CU             A    AAAC 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-430-P2_5p*

mirBase accessionMIMAT0003358
Sequence
0- GCUUUAACAUGGAGGUACCUGCU -23
Get sequence
Proposed targets TargetScanVert: gga-miR-302c-5p
miRDB: MIMAT0003358
Mature sequence

Gga-Mir-430-P2_3p

mirBase accessionMIMAT0003359
Sequence
34- UAAGUGCUUCCAUGUUUCAGUGG -57
Get sequence
Proposed targets TargetScanVert: gga-miR-302c-3p
miRDB: MIMAT0003359