MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-430-P2

Family name MIR-430 (all species)
Seed AAGUGCU
Species Cow (Bos taurus)
MiRBase ID bta-mir-302c
Paralogues Bta-Mir-430-P1  Bta-Mir-430-P3  Bta-Mir-430-P4  Bta-Mir-430-P5  Bta-Mir-430-P7 
Orthologues Ami-Mir-430-P2  Cfa-Mir-430-P2  Cli-Mir-430-P2  Cmi-Mir-430-P2  Cpi-Mir-430-P2  Cpo-Mir-430-P2  Dno-Mir-430-P2  Dre-Mir-430-o2a1  Dre-Mir-430-o2a2  Dre-Mir-430-o2a3  Dre-Mir-430-o2a4  Dre-Mir-430-o2a5  Dre-Mir-430-o2a6  Dre-Mir-430-o2a7  Dre-Mir-430-o2a8  Dre-Mir-430-o2a9  Dre-Mir-430-o2a10  Dre-Mir-430-o2a11  Dre-Mir-430-o2a12  Dre-Mir-430-o2a13  Dre-Mir-430-o2a14  Dre-Mir-430-o2b  Dre-Mir-430-o2c1  Dre-Mir-430-o2c2  Dre-Mir-430-o2c3  Dre-Mir-430-o2d1  Dre-Mir-430-o2d2  Ete-Mir-430-P2  Gga-Mir-430-P2  Hsa-Mir-430-P2  Mdo-Mir-430-P2  Mml-Mir-430-P2  Mmu-Mir-430-P2  Oan-Mir-430-P2  Ocu-Mir-430-P2  Sha-Mir-430-P2  Spt-Mir-430-P2  Sto-Mir-430-P2  Tgu-Mir-430-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037333.1: 12980362-12980421 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P2)
Mir-430-P1 NC_037333.1: 12980223-12980284 [+] UCSC Ensembl
Mir-430-P2 NC_037333.1: 12980362-12980421 [+] UCSC Ensembl
Mir-430-P3 NC_037333.1: 12980774-12980834 [+] UCSC Ensembl
Mir-430-P4 NC_037333.1: 12980950-12981012 [+] UCSC Ensembl
Mir-92-P2a NC_037333.1: 12981076-12981135 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUAUCGAAGCUAAAAGGGGAUCCCCUCUGCUUUAACAUGGGGGUACCUGCUGUGUAAAGCAAAAGUAAGUGCUUCCAUGUUUCAGUGGAGGUGUCUCCAAGUCAAUACUUUAAAAGGA
Get precursor sequence
Structure
        10           20        30        40        50         
AUUUAUCGAAGCUAAAA---|     CC    UG  UU             C    GUGUA 
                    GGGGAU  CCUC  CU  AACAUGGGGGUAC UGCU     A
                    CCUCUG  GGAG  GA  UUGUACCUUCGUG AUGA     A
AGGAAAAUUUCAUAACUGAA^     U-    GU  CU             A    AAACG 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-430-P2_5p*

mirBase accessionNone
Sequence
0- GCUUUAACAUGGGGGUACCUGCU -23
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Mature sequence

Bta-Mir-430-P2_3p

mirBase accessionMIMAT0009281
Sequence
37- UAAGUGCUUCCAUGUUUCAGUGG -60
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Proposed targets TargetScanVert: bta-miR-302c