MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-92-P2a

Family name MIR-92 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-367
Paralogues Eca-Mir-92-P1a  Eca-Mir-92-P1c  Eca-Mir-92-P1d  Eca-Mir-92-P2c  Eca-Mir-92-P2d 
Orthologues Aca-Mir-92-P2a  Ami-Mir-92-P2a  Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2a  Cel-Mir-92  Cfa-Mir-92-P2a  Cja-Mir-92-P2a  Cli-Mir-92-P2a  Cmi-Mir-92-P2a  Cpi-Mir-92-P2a  Cpo-Mir-92-P2a  Dno-Mir-92-P2a  Esc-Mir-92  Ete-Mir-92-P2a  Gga-Mir-92-P2a  Gja-Mir-92-P2a  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P2a  Isc-Mir-92  Laf-Mir-92-P2a  Mdo-Mir-92-P2a  Mml-Mir-92-P2a  Mmr-Mir-92-P2a  Mmu-Mir-92-P2a  Mun-Mir-92-P2a  Neu-Mir-92-P2a  Oan-Mir-92-P2a  Obi-Mir-92  Ocu-Mir-92-P2a  Pab-Mir-92-P2a  Rno-Mir-92-P2a  Sha-Mir-92-P2a  Sme-Mir-92  Spt-Mir-92-P2a  Sto-Mir-92-P2a  Tgu-Mir-92-P2a  Xla-Mir-92-P2a  Xtr-Mir-92-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009149.1: 114121041-114121100 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P2a)		 Mir-430-P1 CM009149.1: 114120447-114120508 [+] UCSC Ensembl
Mir-430-P2 CM009149.1: 114120580-114120639 [+] UCSC Ensembl
Mir-430-P3 CM009149.1: 114120752-114120812 [+] UCSC Ensembl
Mir-430-P4 CM009149.1: 114120912-114120972 [+] UCSC Ensembl
Mir-92-P2a CM009149.1: 114121041-114121100 [+] UCSC Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
ACUGUGCAGAGACCUUGGGCAUAUGCCAUCACUGUUGCUAAUAUGCAACUCUGUUCAAUACAAACUGGAAUUGCACUUUAGCAAUGGUGACGGAGUGUGUCAACUGCCAACAAUUACCAC
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Structure
        10          20        30        40        50         
ACUGUGCAGAGACCUUG--|      G  A             UA     C   GUUCAA 
                   GGCAUAU CC UCACUGUUGCUAA  UGCAA UCU      U
                   CUGUGUG GG AGUGGUAACGAUU  ACGUU AGG      A
CACCAUUAACAACCGUCAA^      A  C             UC     A   UCAAAC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-92-P2a_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACUGUUGCUAAUAUGCAACUCU -22
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Mature sequence

Eca-Mir-92-P2a_3p (predicted)
mirBase accessionMIMAT0012918
Sequence 
38- AAUUGCACUUUAGCAAUGGUGA -60
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