MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-430-P38

Family name MIR-430 (all species)
Species Human (Homo sapiens)
MiRBase ID hsa-mir-518d
Paralogues Hsa-Mir-430-P1  Hsa-Mir-430-P2  Hsa-Mir-430-P3  Hsa-Mir-430-P4  Hsa-Mir-430-P5  Hsa-Mir-430-P6  Hsa-Mir-430-P7  Hsa-Mir-430-P8a  Hsa-Mir-430-P8b  Hsa-Mir-430-P9  Hsa-Mir-430-P10  Hsa-Mir-430-P11  Hsa-Mir-430-P12a  Hsa-Mir-430-P12b  Hsa-Mir-430-P13  Hsa-Mir-430-P14  Hsa-Mir-430-P15  Hsa-Mir-430-P16a  Hsa-Mir-430-P16b  Hsa-Mir-430-P17  Hsa-Mir-430-P18  Hsa-Mir-430-P19  Hsa-Mir-430-P20  Hsa-Mir-430-P21  Hsa-Mir-430-P22  Hsa-Mir-430-P23  Hsa-Mir-430-P24  Hsa-Mir-430-P25  Hsa-Mir-430-P26  Hsa-Mir-430-P27  Hsa-Mir-430-P28  Hsa-Mir-430-P29a  Hsa-Mir-430-P29b  Hsa-Mir-430-P29c  Hsa-Mir-430-P30  Hsa-Mir-430-P31a  Hsa-Mir-430-P31b  Hsa-Mir-430-P32  Hsa-Mir-430-P33a  Hsa-Mir-430-P33b  Hsa-Mir-430-P34a  Hsa-Mir-430-P34b  Hsa-Mir-430-P35  Hsa-Mir-430-P36  Hsa-Mir-430-P37a  Hsa-Mir-430-P37b  Hsa-Mir-430-P37c  Hsa-Mir-430-P39  Hsa-Mir-430-P40a  Hsa-Mir-430-P40b  Hsa-Mir-430-P41a  Hsa-Mir-430-P41b 
Orthologues Mml-Mir-430-P38  Pab-Mir-430-P38  Pbv-Mir-430-o38 
Node of Origin (locus) Catarrhini
Node of Origin (family) Vertebrata
Genome context
(hg38)
chr19: 53734892-53734950 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P38)
Mir-430-P12a chr19: 53685022-53685080 [+] UCSC Ensembl
Mir-430-P15 chr19: 53686484-53686543 [+] UCSC Ensembl
Mir-430-P16a chr19: 53688495-53688553 [+] UCSC Ensembl
Mir-430-P17 chr19: 53690895-53690953 [+] UCSC Ensembl
Mir-430-P18 chr19: 53694406-53694464 [+] UCSC Ensembl
Mir-430-P19 chr19: 53695225-53695284 [+] UCSC Ensembl
Mir-430-P20 chr19: 53697547-53697605 [+] UCSC Ensembl
Mir-430-P21 chr19: 53698400-53698458 [+] UCSC Ensembl
Mir-430-P22 chr19: 53700030-53700088 [+] UCSC Ensembl
Mir-430-P23 chr19: 53701228-53701288 [+] UCSC Ensembl
Mir-430-P24 chr19: 53702750-53702808 [+] UCSC Ensembl
Mir-430-P25 chr19: 53706266-53706324 [+] UCSC Ensembl
Mir-430-P26 chr19: 53707468-53707527 [+] UCSC Ensembl
Mir-430-P27 chr19: 53708759-53708817 [+] UCSC Ensembl
Mir-430-P28 chr19: 53711017-53711075 [+] UCSC Ensembl
Mir-430-P29a chr19: 53712282-53712342 [+] UCSC Ensembl
Mir-430-P30 chr19: 53713361-53713422 [+] UCSC Ensembl
Mir-430-P31a chr19: 53716608-53716668 [+] UCSC Ensembl
Mir-430-P32 chr19: 53720111-53720170 [+] UCSC Ensembl
Mir-430-P29b chr19: 53721081-53721139 [+] UCSC Ensembl
Mir-430-P33a chr19: 53722182-53722241 [+] UCSC Ensembl
Mir-430-P34a chr19: 53725457-53725514 [+] UCSC Ensembl
Mir-430-P35 chr19: 53726928-53726982 [+] UCSC Ensembl
Mir-430-P36 chr19: 53729853-53729911 [+] UCSC Ensembl
Mir-430-P37a chr19: 53731019-53731078 [+] UCSC Ensembl
Mir-430-P38 chr19: 53734892-53734950 [+] UCSC Ensembl
Mir-430-P34b chr19: 53736860-53736922 [+] UCSC Ensembl
Mir-430-P37b chr19: 53739348-53739407 [+] UCSC Ensembl
Mir-430-P29c chr19: 53741332-53741390 [+] UCSC Ensembl
Mir-430-P33b chr19: 53742528-53742587 [+] UCSC Ensembl
Mir-430-P31b chr19: 53748650-53748710 [+] UCSC Ensembl
Mir-430-P39 chr19: 53751226-53751285 [+] UCSC Ensembl
Mir-430-P40a chr19: 53752410-53752470 [+] UCSC Ensembl
Mir-430-P37c chr19: 53754031-53754089 [+] UCSC Ensembl
Mir-430-P41b chr19: 53756756-53756818 [+] UCSC Ensembl
Mir-430-P16b chr19: 53758246-53758304 [+] UCSC Ensembl
Mir-430-P41a chr19: 53761148-53761210 [+] UCSC Ensembl
Mir-430-P40b chr19: 53762358-53762418 [+] UCSC Ensembl
Seed UCUAGAG
Precursor
(pre-Mir +30nt flank)
GCUGGAGUGAGAAGAUCCCAUGCUGUGACCCUCUAGAGGGAAGCACUUUCUGUUGUCUGAAAGAAACCAAAGCGCUUCCCUUUGGAGCGUUACGGUUUGAGAAACUCAAUGUUGAAGUU
Get precursor sequence
Structure
        10          20        30        40        50         
GCUGGAGUGAGAAGAUCC--| U        C              A    CUGUUGUCU 
                    CA GCUGUGAC CUCUAGAGGGAAGC CUUU         \
                    GU UGGCAUUG GAGGUUUCCCUUCG GAAA         G
UUGAAGUUGUAACUCAAAGA^ U        C              C    CCAAAGAAA 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
- +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-430-P38_5p

mirBase accessionMIMAT0005456
Sequence
0- CUCUAGAGGGAAGCACUUUCUG -22
Get sequence
Proposed targets microrna.org: MIMAT0005456
TargetScanVert: hsa-miR-518d-5p
TargetMiner: hsa-miR-518d-5p
miRDB: MIMAT0005456
Star sequence

Hsa-Mir-430-P38_3p*

mirBase accessionMIMAT0002864
Sequence
37- CAAAGCGCUUCCCUUUGGAGCG -59
Get sequence
Proposed targets microrna.org: MIMAT0002864
TargetScanVert: hsa-miR-518d-3p
TargetMiner: hsa-miR-518d-3p
miRDB: MIMAT0002864