Mir-430-P6

MirGeneDB ID

Mml-Mir-430-P6

Family name

MIR-430 (all species)

Seed

AAGUGCU

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-372

Paralogues

Mml-Mir-430-P1 Mml-Mir-430-P2 Mml-Mir-430-P3 Mml-Mir-430-P4 Mml-Mir-430-P5 Mml-Mir-430-P7 Mml-Mir-430-P8 Mml-Mir-430-P9c Mml-Mir-430-P9d Mml-Mir-430-P9e Mml-Mir-430-P10 Mml-Mir-430-P11a Mml-Mir-430-P11b Mml-Mir-430-P12 Mml-Mir-430-P13a1 Mml-Mir-430-P13a2 Mml-Mir-430-P13b Mml-Mir-430-P13c Mml-Mir-430-P14 Mml-Mir-430-P18 Mml-Mir-430-P19 Mml-Mir-430-P21 Mml-Mir-430-P24a1 Mml-Mir-430-P24a2 Mml-Mir-430-P24b Mml-Mir-430-P26a Mml-Mir-430-P26b Mml-Mir-430-P27 Mml-Mir-430-P28 Mml-Mir-430-P29c Mml-Mir-430-P29d Mml-Mir-430-P31c Mml-Mir-430-P31d Mml-Mir-430-P33 Mml-Mir-430-P35d Mml-Mir-430-P35e Mml-Mir-430-P35f-v1 Mml-Mir-430-P35f-v2 Mml-Mir-430-P37 Mml-Mir-430-P41 Mml-Mir-430-P42 Mml-Mir-430-P43 Mml-Mir-430-P44 Mml-Mir-430-P45 Mml-Mir-430-P47 Mml-Mir-430-P49

Orthologues

Dno-Mir-430-P6 Hsa-Mir-430-P6 Mmu-Mir-430-P6 Rno-Mir-430-P6a Rno-Mir-430-P6b Xla-Mir-430-o6a Xla-Mir-430-o6b Xtr-Mir-430-o6

Node of Origin (locus)

Eutheria

Node of Origin (family)

Vertebrata

Genome context
(rheMac8_trace)

chr19: 49142282-49142340 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-430-P6)

Mir-430-P24a1 chr19: 49092996-49093055 [+] UCSC Ensembl
Mir-430-P35e chr19: 49094969-49095027 [+] UCSC Ensembl
Mir-430-P37 chr19: 49102341-49102401 [+] UCSC Ensembl
Mir-430-P29c chr19: 49104035-49104095 [+] UCSC Ensembl
Mir-430-P41 chr19: 49105608-49105667 [+] UCSC Ensembl
Mir-430-P24b chr19: 49108097-49108156 [+] UCSC Ensembl
Mir-430-P31d chr19: 49109643-49109704 [+] UCSC Ensembl
Mir-430-P31c chr19: 49114300-49114361 [+] UCSC Ensembl
Mir-430-P5 chr19: 49142073-49142134 [+] UCSC Ensembl
Mir-430-P6 chr19: 49142282-49142340 [+] UCSC Ensembl
Mir-430-P7 chr19: 49142989-49143049 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UCUUGCAGGUAGAGCUGCUCACCCUGUGAUCCUCAAAUGUGGAGCACUAUUCUGAUGUCCAAGUGGAAAGUGCUGCGACAUUUGAGCGUCACCGGUGACGCCCAUACCAACGGAUGCCG

Get precursor sequence

Structure

        10           20        30        40         50         
UCUUGCAGGUAGAGCUGC---|    CU     C         - G      A    GAUGU 
                     UCACC  GUGAU CUCAAAUGU G AGCACU UUCU     \
                     AGUGG  CACUG GAGUUUACA C UCGUGA AAGG     C
GCCGUAGGCAACCAUACCCGC^    C-     C         G G      -    UGAAC 
       110       100         90        80        70         60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-430-P6_5p*

mirBase accession

MIMAT0026858

Sequence

0- CCUCAAAUGUGGAGCACUAUUCU -23

Get sequence

Proposed targets

TargetScanVert: mml-miR-372-5p

Mature sequence

Mml-Mir-430-P6_3p

mirBase accession

MIMAT0006298

Sequence

36- AAAGUGCUGCGACAUUUGAGCGU -59

Get sequence

Proposed targets

TargetScanVert: mml-miR-372-3p