MirGeneDB 2.1

MirGeneDB ID

Oan-Mir-430-P3

Family name MIR-430 (all species)
Seed AAGUGCU
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-302-1
Paralogues Oan-Mir-430-P1  Oan-Mir-430-P2  Oan-Mir-430-P4  Oan-Mir-430-P53  Oan-Mir-430-P54  Oan-Mir-430-P55  Oan-Mir-430-P56  Oan-Mir-430-P57  Oan-Mir-430-P58  Oan-Mir-430-P59  Oan-Mir-430-P60  Oan-Mir-430-P61 
Orthologues Aca-Mir-430-P3  Ami-Mir-430-P3  Bta-Mir-430-P3  Cfa-Mir-430-P3  Cli-Mir-430-P3  Cmi-Mir-430-P3  Cpi-Mir-430-P3  Cpo-Mir-430-P3  Dno-Mir-430-P3  Dre-Mir-430-o3a1  Dre-Mir-430-o3a2  Dre-Mir-430-o3a3  Dre-Mir-430-o3a4  Dre-Mir-430-o3a5  Dre-Mir-430-o3a6  Dre-Mir-430-o3a7  Dre-Mir-430-o3a8  Dre-Mir-430-o3a9  Dre-Mir-430-o3a10  Dre-Mir-430-o3a11  Dre-Mir-430-o3a12  Dre-Mir-430-o3a13  Dre-Mir-430-o3a14  Dre-Mir-430-o3a15  Dre-Mir-430-o3a16  Dre-Mir-430-o3b1  Dre-Mir-430-o3b2  Ete-Mir-430-P3  Gga-Mir-430-P3  Gja-Mir-430-P3  Hsa-Mir-430-P3  Mdo-Mir-430-P3  Mml-Mir-430-P3  Mmu-Mir-430-P3  Ocu-Mir-430-P3  Rno-Mir-430-P3  Sha-Mir-430-P3  Spt-Mir-430-P3  Sto-Mir-430-P3  Tgu-Mir-430-P3  Xla-Mir-430-P3a  Xla-Mir-430-P3b  Xtr-Mir-430-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041739.1: 34493236-34493293 [+]
Clustered miRNAs
(< 50kb from Mir-430-P3)
Mir-430-P1 NC_041739.1: 34492840-34492898 [+]
Mir-430-P3 NC_041739.1: 34493236-34493293 [+]
Precursor
(pre-Mir +30nt flank)
UUUGUAAAUUUGAUUUCAGGGCUCCCUGUCACUUAAACGUGGAUAAACUUGCUUUACUUUUAAAGUAAGUGCUUCCAUGUUUUAGUGAUGGUGUUACCAAAAUUUCUUCGAUGUGAAU
Get precursor sequence
Structure
        10          20        30        40        50        
UUUGUAAAUUUGAUUUCA--| GCUCC        U         UAA       UUAC 
                    GG     CUGUCACU AAACGUGGA   ACUUGCU    U
                    CC     GGUAGUGA UUUGUACCU   UGAAUGA    U
UAAGUGUAGCUUCUUUAAAA^ AUUGU        U         UCG       AAUU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Oan-Mir-430-P3_5p*

mirBase accessionNone
Sequence
0- ACUUAAACGUGGAUAAACUUGCU -23
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Mature sequence

Oan-Mir-430-P3_3p

mirBase accessionMIMAT0007195
Sequence
35- UAAGUGCUUCCAUGUUUUAGUGA -58
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