MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-430-P3a

Family name MIR-430 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xla-Mir-430-o5o1  Xla-Mir-430-o5o2  Xla-Mir-430-o5p1  Xla-Mir-430-o5p2  Xla-Mir-430-o5q1  Xla-Mir-430-o5q2  Xla-Mir-430-o5r  Xla-Mir-430-o5s  Xla-Mir-430-o6a  Xla-Mir-430-o6b  Xla-Mir-430-o7a  Xla-Mir-430-o7b  Xla-Mir-430-o8a  Xla-Mir-430-o8b  Xla-Mir-430-o9  Xla-Mir-430-P1a  Xla-Mir-430-P1b  Xla-Mir-430-P3b 
Orthologues Aca-Mir-430-P3  Ami-Mir-430-P3  Bta-Mir-430-P3  Cfa-Mir-430-P3  Cja-Mir-430-P3  Cli-Mir-430-P3  Cmi-Mir-430-P3  Cpi-Mir-430-P3  Cpo-Mir-430-P3  Dno-Mir-430-P3  Dre-Mir-430-o3a1  Dre-Mir-430-o3a2  Dre-Mir-430-o3a3  Dre-Mir-430-o3a4  Dre-Mir-430-o3a5  Dre-Mir-430-o3a6  Dre-Mir-430-o3a7  Dre-Mir-430-o3a8  Dre-Mir-430-o3a9  Dre-Mir-430-o3a10  Dre-Mir-430-o3a11  Dre-Mir-430-o3a12  Dre-Mir-430-o3a13  Dre-Mir-430-o3a14  Dre-Mir-430-o3a15  Dre-Mir-430-o3a16  Eca-Mir-430-P3  Ete-Mir-430-P3  Gga-Mir-430-P3  Gja-Mir-430-P3  Hsa-Mir-430-P3  Laf-Mir-430-P3  Mdo-Mir-430-P3  Mml-Mir-430-P3  Mmr-Mir-430-P3  Mmu-Mir-430-P3  Neu-Mir-430-P3  Oan-Mir-430-P3  Ocu-Mir-430-P3  Pab-Mir-430-P3  Rno-Mir-430-P3  Sha-Mir-430-P3  Spt-Mir-430-P3  Sto-Mir-430-P3  Tgu-Mir-430-P3  Xtr-Mir-430-P3 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030724.1: 61970990-61971049 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-P3a)		 Mir-430-o4a NC_030724.1: 61970555-61970612 [-] UCSC Ensembl
Mir-430-P1a NC_030724.1: 61970687-61970748 [-] UCSC Ensembl
Mir-430-P3a NC_030724.1: 61970990-61971049 [-] UCSC Ensembl
Seed AAGUGCU
Precursor
(pre-Mir +30nt flank)		 
UCAGUCAAUUGUCACCACGGAUCUCCUUACACUUAAACAUUGAGGGACUUUUUCCCAUGUACUGCUGCAAGUGCUUCAAUGUUUUGGUGAAAGAAGAUCCAGCCACCCAAUGCAAUGCCA
Get precursor sequence
Structure
        10          20        30        40        50         
UCAGUCAAUUGUCACCAC--|     C   A    U           G    UUUCCCAU 
                    GGAUCU CUU CACU AAACAUUGAGG ACUU        G
                    CCUAGA GAA GUGG UUUGUAACUUC UGAA        U
ACCGUAACGUAACCCACCGA^     A   A    U           G    CGUCGUCA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Em
Star sequence

Xla-Mir-430-P3a_5p*
mirBase accessionNone
Sequence 
0- ACUUAAACAUUGAGGGACUUUUU -23
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Mature sequence

Xla-Mir-430-P3a_3p
mirBase accessionNone
Sequence 
37- CAAGUGCUUCAAUGUUUUGGUGA -60
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