MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-430-o8b

Family name MIR-430 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-430-o4a  Xla-Mir-430-o4b  Xla-Mir-430-o5o1  Xla-Mir-430-o5o2  Xla-Mir-430-o5p1  Xla-Mir-430-o5p2  Xla-Mir-430-o5q1  Xla-Mir-430-o5q2  Xla-Mir-430-o5r  Xla-Mir-430-o5s  Xla-Mir-430-o6a  Xla-Mir-430-o6b  Xla-Mir-430-o7a  Xla-Mir-430-o7b  Xla-Mir-430-o8a  Xla-Mir-430-o9  Xla-Mir-430-P1a  Xla-Mir-430-P1b  Xla-Mir-430-P3a  Xla-Mir-430-P3b 
Orthologues Cja-Mir-430-P8  Dno-Mir-430-P8  Ete-Mir-430-P8  Hsa-Mir-430-P8b  Mml-Mir-430-P8  Pab-Mir-430-P8  Xtr-Mir-430-o8 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030739.1: 26163302-26163359 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-430-o8b)		 Mir-430-o6b NC_030739.1: 26162703-26162762 [+] UCSC Ensembl
Mir-430-o7b NC_030739.1: 26162871-26162929 [+] UCSC Ensembl
Mir-430-o8b NC_030739.1: 26163302-26163359 [+] UCSC Ensembl
Seed AAGUGCU
Precursor
(pre-Mir +30nt flank)		 
CAAGCACACGACCCUUGCUGGGCUCACAGCAGCCAAACAGAAGCUCUGUCUUGUCGUCUCUAUGAGAAAGUGCUUCUUGUUCGGCUGUUUUGGGAACCGGGAAAUCGUCUGGAUCCCC
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Structure
        10         20         30         40        50        
CAAGCACACGACCCUUG-    G-    C       A   -|     U  G   UGUCGU 
                  CUGG  CUCA AGCAGCC AAC AGAAGC CU UCU      \
                  GGCC  GGGU UUGUCGG UUG UCUUCG GA AGA      C
CCCCUAGGUCUGCUAAAG    AA    U       C   U^     U  A   GUAUCU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Em
Star sequence

Xla-Mir-430-o8b_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGCCAAACAGAAGCUCUGUCU -21
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Mature sequence

Xla-Mir-430-o8b_3p
mirBase accessionNone
Sequence 
36- AAAGUGCUUCUUGUUCGGCUGU -58
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