MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-430-P8

Family name MIR-430 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-430-P1  Ete-Mir-430-P2  Ete-Mir-430-P3  Ete-Mir-430-P4  Ete-Mir-430-P5 
Orthologues Cja-Mir-430-P8  Dno-Mir-430-P8  Hsa-Mir-430-P8a  Hsa-Mir-430-P8b  Mml-Mir-430-P8  Pab-Mir-430-P8  Xla-Mir-430-o8a  Xla-Mir-430-o8b  Xtr-Mir-430-o8 
Node of Origin (locus) Eutheria
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980399: 668630-668689 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-430-P8)		 Mir-430-P8 JH980399: 668630-668689 [+] UCSC
Mir-430-P5 JH980399: 699442-699501 [+] UCSC
Novel-3 JH980399: 703052-703110 [+] UCSC
Seed AAGUGCU
Precursor
(pre-Mir +30nt flank)		 
CUCCAGUGGCGAGUGACCUCGGUCCGGAACGCUCAGCCCUGGGGGCACUUUCUUGGUACCUGCAAAGAAAGUGCUGUCAGAGUUGAGGAUCCCUGGCUGCAGGAAGGCGUCUGGCUUCGU
Get precursor sequence
Structure
        10          20        30        40        50         
CUCCAGUGGCGAGUGAC-  -|    C  AACG      C    G          UGGUA 
                  CU CGGUC GG    CUCAGC CUGG GGCACUUUCU     C
                  GA GUCGG CC    GAGUUG GACU UCGUGAAAGA     C
UGCUUCGGUCUGCGGAAG  C^    U  CUAG      A    G          AACGU 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
CommentThe Dicer cut in tenrec is +1 relative to human generating a seed-shifted mature 3p read. Armadillo the only other taxon with reads from this miRNA expresses both versions equally but lowly and thus it is unclear which version predominates in vivo.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Ete-Mir-430-P8_5p* (predicted)
mirBase accessionNone
Sequence 
0- GCUCAGCCCUGGGGGCACUUUCU -23
Get sequence
Mature sequence

Ete-Mir-430-P8_3p
mirBase accessionNone
Sequence 
37- AAAGUGCUGUCAGAGUUGAGGAU -60
Get sequence