MirGeneDB ID | Mmu-Mir-430-P1 |
Family name |
MIR-430 (all species) |
Species |
House mouse (Mus musculus) |
MiRBase ID |
mmu-mir-302b
|
Paralogues |
Mmu-Mir-430-P2
Mmu-Mir-430-P3
Mmu-Mir-430-P4
Mmu-Mir-430-P5a
Mmu-Mir-430-P5b
Mmu-Mir-430-P5c
Mmu-Mir-430-P6
Mmu-Mir-430-P7a
Mmu-Mir-430-P7b
Mmu-Mir-430-P7c
|
Orthologues |
Aca-Mir-430-P1
Ami-Mir-430-P1
Bta-Mir-430-P1
Cfa-Mir-430-P1
Cja-Mir-430-P1
Cli-Mir-430-P1
Cmi-Mir-430-P1
Cpi-Mir-430-P1
Cpo-Mir-430-P1
Dno-Mir-430-P1
Dre-Mir-430-o1a
Dre-Mir-430-o1b1
Dre-Mir-430-o1b2
Dre-Mir-430-o1b3
Dre-Mir-430-o1b4
Dre-Mir-430-o1b5
Dre-Mir-430-o1b6
Dre-Mir-430-o1b7
Dre-Mir-430-o1b8
Dre-Mir-430-o1c
Dre-Mir-430-o1d1
Dre-Mir-430-o1d2
Dre-Mir-430-o1d3
Dre-Mir-430-o1d4
Dre-Mir-430-o1d5
Dre-Mir-430-o1d6
Dre-Mir-430-o1d7
Dre-Mir-430-o1e1
Dre-Mir-430-o1e2
Dre-Mir-430-o1e3
Eca-Mir-430-P1
Ete-Mir-430-P1
Gga-Mir-430-P1
Hsa-Mir-430-P1
Laf-Mir-430-P1
Mdo-Mir-430-P1
Mml-Mir-430-P1
Mmr-Mir-430-P1
Mun-Mir-430-P1
Neu-Mir-430-P1
Oan-Mir-430-P1
Ocu-Mir-430-P1
Pab-Mir-430-P1
Rno-Mir-430-P1
Sha-Mir-430-P1
Spt-Mir-430-P1
Sto-Mir-430-P1
Tgu-Mir-430-P1
Xla-Mir-430-P1a
Xla-Mir-430-P1b
Xtr-Mir-430-P1
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (mm10) |
chr3: 127545238-127545297 [+]
UCSC
Ensembl
|
Clustered miRNAs (< 50kb from Mir-430-P1) |
Mir-430-P1
chr3: 127545238-127545297 [+]
UCSC
Ensembl
Mir-430-P2
chr3: 127545368-127545427 [+]
UCSC
Ensembl
Mir-430-P3
chr3: 127545501-127545561 [+]
UCSC
Ensembl
Mir-430-P4
chr3: 127545629-127545687 [+]
UCSC
Ensembl
Mir-92-P2a
chr3: 127545741-127545800 [+]
UCSC
Ensembl
|
Seed |
AAGUGCU |
Precursor (pre-Mir +30nt flank) |
ACUAGUUGCCUUGUGGGUGGGUUCCCUUCAACUUUAACAUGGGAAUGCUUUCUGUCUCAUCGAAGAGUAAGUGCUUCCAUGUUUUAGUAGAAGUGAAUUCAAGAAACUCUGGAAUAAGAA
Get precursor sequence
|
Structure | 10 20 30 40 50
ACUAGUUGCCUUGUGGG--| C A UU AU U GUCUC
UGGGUUC CUUC ACU AACAUGGGA GCUU CU A
ACUUAAG GAAG UGA UUGUACCUU UGAA GA U
AAGAAUAAGGUCUCAAAGA^ U A UU CG U GAAGC
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Br |
Br |
Ce |
Ce |
Em |
Em |
He |
Ki |
Li |
Lu |
Ov |
Pa |
Sk |
Sp |
Te |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Star sequence |
Mmu-Mir-430-P1_5p* |
mirBase accession | MIMAT0003373 |
Sequence |
0- ACUUUAACAUGGGAAUGCUUUCU -23
Get sequence
|
Proposed targets |
microrna.org: MIMAT0003373
TargetScanVert: mmu-miR-302b-5p
miRDB: MIMAT0003373
|
Mature sequence |
Mmu-Mir-430-P1_3p |
mirBase accession | MIMAT0003374 |
Sequence |
37- UAAGUGCUUCCAUGUUUUAGUAG -60
Get sequence
|
Proposed targets |
microrna.org: MIMAT0003374
TargetScanVert: mmu-miR-302b-3p
miRDB: MIMAT0003374
|