MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-92-P1d

Family name MIR-92 (all species)
Seed AUUGCAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-92b
Paralogues Hsa-Mir-92-P1a  Hsa-Mir-92-P1c  Hsa-Mir-92-P2a  Hsa-Mir-92-P2c  Hsa-Mir-92-P2d 
Orthologues Ami-Mir-92-P1d  Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Bta-Mir-92-P1d  Cel-Mir-92  Cfa-Mir-92-P1d  Cmi-Mir-92-P1d  Cpi-Mir-92-P1d  Cpo-Mir-92-P1d  Dno-Mir-92-P1d  Dre-Mir-92-P1d  Esc-Mir-92  Ete-Mir-92-P1d  Gja-Mir-92-P1d  Isc-Mir-92  Lch-Mir-92-P1d  Loc-Mir-92-P1d  Mal-Mir-92-P1d  Mdo-Mir-92-P1d  Mml-Mir-92-P1d  Mmu-Mir-92-P1d  Mun-Mir-92-P1d  Oan-Mir-92-P1d  Obi-Mir-92  Ocu-Mir-92-P1d  Pbv-Mir-92-P1d  Rno-Mir-92-P1d  Sha-Mir-92-P1d  Sme-Mir-92  Spt-Mir-92-P1d  Sto-Mir-92-P1d  Tgu-Mir-92-P1d  Xla-Mir-92-P1d1  Xla-Mir-92-P1d2  Xtr-Mir-92-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(hg38)
chr1: 155195196-155195258 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGCGGGAUCCCGGGCCCCGGGCGGGCGGGAGGGACGGGACGCGGUGCAGUGUUGUUUUUUCCCCCGCCAAUAUUGCACUCGUCCCGGCCUCCGGCCCCCCCGGCCCCCCGGCCUCCCCGCUA
Get precursor sequence
Structure
        10          20        30        40        50        60  
GAGCGGGAUCCCGGGCC--|    C    G     GA       C           GUUUUUU 
                   CCGGG GGGC GGAGG  CGGGACG GGUGCAGUGUU       \
                   GGCCC CCCG CCUCC  GCCCUGC UCACGUUAUAA       C
AUCGCCCCUCCGGCCCCCC^    C    G     G-       -           CCGCCCC 
 120       110       100        90          80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ar Bl Bo Bo Bo Bo Bo Br Br Br Br Br Br Br Br Br Br Br Es Ga He He He He He Ki Li Lu Ly Mu Ne Pa Pl Pl Sk Sp Sp St Su Te Th To Tr Ve
Star sequence

Hsa-Mir-92-P1d_5p*

mirBase accessionMIMAT0004792
Sequence
0- AGGGACGGGACGCGGUGCAGUGUU -24
Get sequence
Proposed targets microrna.org: MIMAT0004792
TargetScanVert: hsa-miR-92b-5p
TargetMiner: hsa-miR-92b-5p
miRDB: MIMAT0004792
Mature sequence

Hsa-Mir-92-P1d_3p

mirBase accessionMIMAT0003218
Sequence
41- UAUUGCACUCGUCCCGGCCUCC -63
Get sequence
Proposed targets microrna.org: MIMAT0003218
TargetScanVert: hsa-miR-92b-3p
TargetMiner: hsa-miR-92b-3p
miRDB: MIMAT0003218