Mir-92-P1c

MirGeneDB ID

Hsa-Mir-92-P1c

Family name

MIR-92 (all species)

Seed

AUUGCAC

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-92a-2

Paralogues

Hsa-Mir-92-P1a Hsa-Mir-92-P1d Hsa-Mir-92-P2a Hsa-Mir-92-P2c Hsa-Mir-92-P2d

Orthologues

Aca-Mir-92-P1c Ami-Mir-92-P1c Asu-Mir-92 Bfl-Mir-92-o1 Bla-Mir-92-o1 Bta-Mir-92-P1c Cel-Mir-92 Cfa-Mir-92-P1c Cli-Mir-92-P1c Cmi-Mir-92-P1c Cpi-Mir-92-P1c Cpo-Mir-92-P1c Dno-Mir-92-P1c Esc-Mir-92 Ete-Mir-92-P1c Gga-Mir-92-P1c Gja-Mir-92-P1c Isc-Mir-92 Mdo-Mir-92-P1c Mml-Mir-92-P1c Mmu-Mir-92-P1c Mun-Mir-92-P1c Oan-Mir-92-P1c Obi-Mir-92 Ocu-Mir-92-P1c Pbv-Mir-92-P1c Rno-Mir-92-P1c Sha-Mir-92-P1c Sme-Mir-92 Spt-Mir-92-P1c Sto-Mir-92-P1c Tgu-Mir-92-P1c Xla-Mir-92-P1c3 Xla-Mir-92-P1c4 Xtr-Mir-92-P1c

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(hg38)

chrX: 134169544-134169604 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-92-P1c)

Mir-92-P2c chrX: 134169382-134169446 [-] UCSC Ensembl
Mir-92-P1c chrX: 134169544-134169604 [-] UCSC Ensembl
Mir-19-P2c chrX: 134169683-134169748 [-] UCSC Ensembl
Mir-17-P4c chrX: 134169812-134169872 [-] UCSC Ensembl
Mir-17-P2c chrX: 134170042-134170106 [-] UCSC Ensembl
Mir-17-P1c chrX: 134170208-134170266 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UAUCUCCAGCACUCAUGCCCAUUCAUCCCUGGGUGGGGAUUUGUUGCAUUACUUGUGUUCUAUAUAAAGUAUUGCACUUGUCCCGGCCUGUGGAAGAAAGGAGGAUUUUUAUCGUCUUCUU

Get precursor sequence

Structure

        10          20        30        40        50        60
UAUCUCCAGCACUCAUGC--| A   A   C     G     UU  U   U    UGUGUU 
                    CC UUC UCC UGGGU GGGAU  GU GCA UACU      C
                    GG AAG AGG GUCCG CCCUG  CA CGU AUGA      U
UUCUUCUGCUAUUUUUAGGA^ A   A   U     G     UU  -   U    AAUAUA 
 .       110       100        90        80         70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UGUG in loop

Tissue expression

Ad	Ar	Bl	Bo	Bo	Bo	Bo	Bo	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Br	Es	Ga	He	He	He	He	He	Ki	Li	Lu	Ly	Mu	Ne	Pa	Pl	Pl	Sk	Sp	Sp	St	Su	Te	Th	To	Tr	Ve

Star sequence

Hsa-Mir-92-P1c_5p*

mirBase accession

MIMAT0004508

Sequence

0- GGGUGGGGAUUUGUUGCAUUACU -23

Get sequence

Proposed targets

microrna.org: MIMAT0004508
TargetScanVert: hsa-miR-92a-2-5p
TargetMiner: hsa-miR-92a-2-5p
miRDB: MIMAT0004508

Mature sequence

Hsa-Mir-92-P1c_3p

mirBase accession

MIMAT0000092

Sequence

39- UAUUGCACUUGUCCCGGCCUGU -61

Get sequence

Proposed targets

microrna.org: MIMAT0000092
TargetScanVert: hsa-miR-92a-3p
TargetMiner: hsa-miR-92a-3p
miRDB: MIMAT0000092