MirGeneDB 2.1
MirGeneDB ID

Hsa-Mir-17-P1c

Family name MIR-17 (all species)
Seed AAAGUGC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-106a
Paralogues Hsa-Mir-17-P1a  Hsa-Mir-17-P1d  Hsa-Mir-17-P2a  Hsa-Mir-17-P2c  Hsa-Mir-17-P4a  Hsa-Mir-17-P4c  Hsa-Mir-17-P4d 
Orthologues Aca-Mir-17-P1c  Ami-Mir-17-P1c  Bta-Mir-17-P1c  Cfa-Mir-17-P1c  Cli-Mir-17-P1c  Cmi-Mir-17-P1c  Cpi-Mir-17-P1c  Cpo-Mir-17-P1c  Dno-Mir-17-P1c  Ete-Mir-17-P1c  Gga-Mir-17-P1c  Gja-Mir-17-P1c  Lch-Mir-17-P1c  Loc-Mir-17-P1c  Mdo-Mir-17-P1c  Mml-Mir-17-P1c  Mmu-Mir-17-P1c  Mun-Mir-17-P1c  Oan-Mir-17-P1c  Ocu-Mir-17-P1c  Pbv-Mir-17-P1c  Rno-Mir-17-P1c  Sha-Mir-17-P1c  Spt-Mir-17-P1c  Sto-Mir-17-P1c  Tgu-Mir-17-P1c  Xla-Mir-17-P1c3  Xla-Mir-17-P1c4  Xtr-Mir-17-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(hg38)		 chrX: 134170208-134170266 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-17-P1c)		 Mir-92-P2c chrX: 134169382-134169446 [-] UCSC Ensembl
Mir-92-P1c chrX: 134169544-134169604 [-] UCSC Ensembl
Mir-19-P2c chrX: 134169683-134169748 [-] UCSC Ensembl
Mir-17-P4c chrX: 134169812-134169872 [-] UCSC Ensembl
Mir-17-P2c chrX: 134170042-134170106 [-] UCSC Ensembl
Mir-17-P1c chrX: 134170208-134170266 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUGCUACAGGAAUAGGCCUUGGCCAUGUAAAAGUGCUUACAGUGCAGGUAGCUUUUUGAGAUCUACUGCAAUGUAAGCACUUCUUACAUUACCAUGGUGAUUUAGUCAAUGGCUACU
Get precursor sequence
Structure
        10          20        30         40        50         
UUUUGCUACAGGAAUAG--   U   CC      -|          G     G   CUUUU 
                   GCC UGG  AUGUAA AAGUGCUUACA UGCAG UAG     \
                   UGG ACC  UACAUU UUCACGAAUGU ACGUC AUC     U
UCAUCGGUAACUGAUUUAG   U   AU      C^          A     -   UAGAG 
       110       100        90        80        70         60
Deep sequencing
Go to detailed chart
CommentThere is a second Dicer cut +1 on the 3p arm.
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ar Bl Bo Bo Bo Bo Bo Br Br Br Br Br Br Br Br Br Br Br Es Ga He He He He He Ki Li Lu Ly Mu Ne Pa Pl Pl Sk Sp Sp St Su Te Th To Tr Ve
Mature sequence

Hsa-Mir-17-P1c_5p
mirBase accessionMIMAT0000103
Sequence 
0- AAAAGUGCUUACAGUGCAGGUAG -23
Get sequence
Proposed targets microrna.org: MIMAT0000103
TargetScanVert: hsa-miR-106a-5p
TargetMiner: hsa-miR-106a-5p
miRDB: MIMAT0000103
Star sequence

Hsa-Mir-17-P1c_3p*
mirBase accessionMIMAT0004517
Sequence 
36- ACUGCAAUGUAAGCACUUCUUAC -59
Get sequence
Proposed targets microrna.org: MIMAT0004517
TargetScanVert: hsa-miR-106a-3p
TargetMiner: hsa-miR-106a-3p
miRDB: MIMAT0004517