Mir-92-P1a

MirGeneDB ID

Hsa-Mir-92-P1a

Family name

MIR-92 (all species)

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-92a-1

Paralogues

Hsa-Mir-92-P1c Hsa-Mir-92-P1d Hsa-Mir-92-P2a Hsa-Mir-92-P2c Hsa-Mir-92-P2d

Orthologues

Aca-Mir-92-P1a Ami-Mir-92-P1a Asu-Mir-92 Bfl-Mir-92-o1 Bla-Mir-92-o1 Bta-Mir-92-P1a Cel-Mir-92 Cfa-Mir-92-P1a Cja-Mir-92-P1a Cli-Mir-92-P1a Cmi-Mir-92-P1a Cpi-Mir-92-P1a Cpo-Mir-92-P1a Dno-Mir-92-P1a Dre-Mir-92-P1a1 Dre-Mir-92-P1a2 Eca-Mir-92-P1a Esc-Mir-92 Ete-Mir-92-P1a Gga-Mir-92-P1a Gja-Mir-92-P1a Gmo-Mir-92-P1a1 Gmo-Mir-92-P1a2 Gsp-Mir-92 Hmi-Mir-92 Isc-Mir-92 Laf-Mir-92-P1a Lch-Mir-92-P1a Loc-Mir-92-P1a Mal-Mir-92-P1a1 Mal-Mir-92-P1a2 Mdo-Mir-92-P1a Mml-Mir-92-P1a Mmr-Mir-92-P1a Mmu-Mir-92-P1a Mun-Mir-92-P1a Oan-Mir-92-P1a5 Oan-Mir-92-P1a6 Oan-Mir-92-P1a7 Oan-Mir-92-P1a8 Obi-Mir-92 Ocu-Mir-92-P1a Pab-Mir-92-P1a Pbv-Mir-92-P1a Rno-Mir-92-P1a Sha-Mir-92-P1a Sme-Mir-92 Spt-Mir-92-P1a Sto-Mir-92-P1a Tgu-Mir-92-P1a Tni-Mir-92-P1a1 Tni-Mir-92-P1a2 Xla-Mir-92-P1a3 Xla-Mir-92-P1a4 Xtr-Mir-92-P1a

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(hg38)

chr13: 91351324-91351382 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-92-P1a)

Mir-17-P1a chr13: 91350618-91350677 [+] UCSC Ensembl
Mir-17-P2a chr13: 91350756-91350820 [+] UCSC Ensembl
Mir-19-P1a chr13: 91350904-91350961 [+] UCSC Ensembl
Mir-17-P4a chr13: 91351072-91351130 [+] UCSC Ensembl
Mir-19-P2a chr13: 91351207-91351267 [+] UCSC Ensembl
Mir-92-P1a chr13: 91351324-91351382 [+] UCSC Ensembl

Seed

AUUGCAC

Precursor
(pre-Mir +30nt flank)

AGUAAGGGAAACUCAAACCCCUUUCUACACAGGUUGGGAUCGGUUGCAAUGCUGUGUUUCUGUAUGGUAUUGCACUUGUCCCGGCCUGUUGAGUUUGGUGGGGAUUGUGACCAGAAGAU

Get precursor sequence

Structure

        10          20        30        40        50         
AGUAAGGGAAACUCAAA-  -| UUU  AC            C   U        GUGUU 
                  CC CC   CU  ACAGGUUGGGAU GGU GCAAUGCU     U
                  GG GG   GA  UGUCCGGCCCUG UCA CGUUAUGG     C
UAGAAGACCAGUGUUAGG  U^ UUU  GU            U   -        UAUGU 
       110       100        90        80         70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UGUG in loop

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-92-P1a_5p*

mirBase accession

MIMAT0004507

Sequence

0- AGGUUGGGAUCGGUUGCAAUGCU -23

Get sequence

Proposed targets

microrna.org: MIMAT0004507
TargetScanVert: hsa-miR-92a-1-5p
TargetMiner: hsa-miR-92a-1-5p
miRDB: MIMAT0004507

Mature sequence

Hsa-Mir-92-P1a_3p

mirBase accession

MIMAT0000092

Sequence

37- UAUUGCACUUGUCCCGGCCUGU -59

Get sequence

Proposed targets

microrna.org: MIMAT0000092
TargetScanVert: hsa-miR-92a-3p
TargetMiner: hsa-miR-92a-3p
miRDB: MIMAT0000092