Mir-92-P1a7

MirGeneDB ID

Oan-Mir-92-P1a7

Family name

MIR-92 (all species)

Species

Platypus (Ornithorhynchus anatinus)

MiRBase ID

oan-mir-92a-2

Paralogues

Oan-Mir-92-P1a5 Oan-Mir-92-P1a6 Oan-Mir-92-P1a8 Oan-Mir-92-P1c Oan-Mir-92-P1d Oan-Mir-92-P2a Oan-Mir-92-P2c Oan-Mir-92-P2d

Orthologues

Aca-Mir-92-P1a Ami-Mir-92-P1a Asu-Mir-92 Bfl-Mir-92-o1 Bla-Mir-92-o1 Bta-Mir-92-P1a Cel-Mir-92 Cfa-Mir-92-P1a Cja-Mir-92-P1a Cli-Mir-92-P1a Cmi-Mir-92-P1a Cpi-Mir-92-P1a Cpo-Mir-92-P1a Dno-Mir-92-P1a Eca-Mir-92-P1a Esc-Mir-92 Ete-Mir-92-P1a Gga-Mir-92-P1a Gja-Mir-92-P1a Gsp-Mir-92 Hmi-Mir-92 Hsa-Mir-92-P1a Isc-Mir-92 Laf-Mir-92-P1a Lch-Mir-92-P1a Loc-Mir-92-P1a Mdo-Mir-92-P1a Mml-Mir-92-P1a Mmr-Mir-92-P1a Mmu-Mir-92-P1a Mun-Mir-92-P1a Obi-Mir-92 Ocu-Mir-92-P1a Pab-Mir-92-P1a Pbv-Mir-92-P1a Rno-Mir-92-P1a Sha-Mir-92-P1a Sme-Mir-92 Spt-Mir-92-P1a Sto-Mir-92-P1a Tgu-Mir-92-P1a Xtr-Mir-92-P1a

Node of Origin (locus)

O. anatinus

Node of Origin (family)

Bilateria

Genome context
(mOrnAna1.p.v1_plustraces)

NC_041737.1: 22689293-22689351 [-]

Clustered miRNAs
(< 50kb from Mir-92-P1a7)

Mir-92-P1a7 NC_041737.1: 22689293-22689351 [-]
Mir-19-P2a5 NC_041737.1: 22689406-22689466 [-]
Mir-17-P4a7 NC_041737.1: 22689543-22689601 [-]
Mir-19-P1a NC_041737.1: 22689716-22689773 [-]
Mir-17-P2a NC_041737.1: 22689923-22689987 [-]
Mir-17-P1a NC_041737.1: 22690068-22690128 [-]

Seed

AUUGCAC

Precursor
(pre-Mir +30nt flank)

AGCCAGGAAAAGUCAAACCCCUUUCUACGCAGGUUGGGAUCAGUUGCAAUGCUUUGUUUGUCUAUGGUAUUGCACUUGUCCCGGCCUGUUGAGGUUGCUGGGGAUCGUGGCCGAAAGAU

Get precursor sequence

Structure

        10         20         30        40        50         
AGCCAGGAAAAGUCAAA-  CCUU-|  AC            C   U        UUGUU 
                  CC     UCU  GCAGGUUGGGAU AGU GCAAUGCU     U
                  GG     GGA  UGUCCGGCCCUG UCA CGUUAUGG     G
UAGAAAGCCGGUGCUAGG  UCGUU^  GU            U   -        UAUCU 
       110       100        90        80         70        60