MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-92-P1a

Family name MIR-92 (all species)
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-92a-1
Paralogues Mdo-Mir-92-P1c  Mdo-Mir-92-P1d  Mdo-Mir-92-P2a  Mdo-Mir-92-P2c  Mdo-Mir-92-P2d 
Orthologues Aca-Mir-92-P1a  Ami-Mir-92-P1a  Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Bta-Mir-92-P1a  Cel-Mir-92  Cfa-Mir-92-P1a  Cja-Mir-92-P1a  Cli-Mir-92-P1a  Cmi-Mir-92-P1a  Cpi-Mir-92-P1a  Cpo-Mir-92-P1a  Dno-Mir-92-P1a  Dre-Mir-92-P1a1  Dre-Mir-92-P1a2  Eca-Mir-92-P1a  Esc-Mir-92  Ete-Mir-92-P1a  Gga-Mir-92-P1a  Gja-Mir-92-P1a  Gmo-Mir-92-P1a1  Gmo-Mir-92-P1a2  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P1a  Isc-Mir-92  Laf-Mir-92-P1a  Lch-Mir-92-P1a  Loc-Mir-92-P1a  Mal-Mir-92-P1a1  Mal-Mir-92-P1a2  Mml-Mir-92-P1a  Mmr-Mir-92-P1a  Mmu-Mir-92-P1a  Mun-Mir-92-P1a  Oan-Mir-92-P1a5  Oan-Mir-92-P1a6  Oan-Mir-92-P1a7  Oan-Mir-92-P1a8  Obi-Mir-92  Ocu-Mir-92-P1a  Pab-Mir-92-P1a  Pbv-Mir-92-P1a  Rno-Mir-92-P1a  Sha-Mir-92-P1a  Sme-Mir-92  Spt-Mir-92-P1a  Sto-Mir-92-P1a  Tgu-Mir-92-P1a  Tni-Mir-92-P1a1  Tni-Mir-92-P1a2  Xla-Mir-92-P1a3  Xla-Mir-92-P1a4  Xtr-Mir-92-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(monDom5_add)		 7: 108468200-108468258 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P1a)		 Mir-92-P1a 7: 108468200-108468258 [-] UCSC Ensembl
Mir-19-P2a 7: 108468317-108468377 [-] UCSC Ensembl
Mir-17-P4a 7: 108468450-108468508 [-] UCSC Ensembl
Mir-19-P1a 7: 108468619-108468676 [-] UCSC Ensembl
Mir-17-P2a 7: 108468761-108468825 [-] UCSC Ensembl
Mir-17-P1a 7: 108468905-108468965 [-] UCSC Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
UAUGUGGAAAAGUCAAACCCCUUUCUACACAGGUUGGGAUCAGUUGCAAUGCUGUGUCUGUCUGUAGUAUUGCACUUGUCCCGGCCUGUUGAGUUUGGUGGGGAUUGUGGCCGAGCGAU
Get precursor sequence
Structure
        10          20        30        40        50         
UAUGUGGAAAAGUCAAA-  -| UUU  AC            C   U        GUGUC 
                  CC CC   CU  ACAGGUUGGGAU AGU GCAAUGCU     U
                  GG GG   GA  UGUCCGGCCCUG UCA CGUUAUGA     G
UAGCGAGCCGGUGUUAGG  U^ UUU  GU            U   -        UGUCU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
- +
Br Ce He Ki Te
Star sequence

Mdo-Mir-92-P1a_5p*
mirBase accessionMIMAT0026709
Sequence 
0- AGGUUGGGAUCAGUUGCAAUGCU -23
Get sequence
Proposed targets TargetScanVert: mdo-miR-92a-1-5p
Mature sequence

Mdo-Mir-92-P1a_3p
mirBase accessionMIMAT0004171
Sequence 
37- UAUUGCACUUGUCCCGGCCUGU -59
Get sequence
Proposed targets TargetScanVert: mdo-miR-92a-3p