MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-92-P1d2

Family name MIR-92 (all species)
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-92-P1a3  Xla-Mir-92-P1a4  Xla-Mir-92-P1c3  Xla-Mir-92-P1c4  Xla-Mir-92-P1d1  Xla-Mir-92-P2a  Xla-Mir-92-P2c3  Xla-Mir-92-P2c4  Xla-Mir-92-P2d3  Xla-Mir-92-P2d4 
Orthologues Ami-Mir-92-P1d  Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Bta-Mir-92-P1d  Cel-Mir-92  Cfa-Mir-92-P1d  Cja-Mir-92-P1d  Cmi-Mir-92-P1d  Cpi-Mir-92-P1d  Cpo-Mir-92-P1d  Dno-Mir-92-P1d  Dre-Mir-92-P1d  Eca-Mir-92-P1d  Esc-Mir-92  Ete-Mir-92-P1d  Gja-Mir-92-P1d  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P1d  Isc-Mir-92  Laf-Mir-92-P1d  Lch-Mir-92-P1d  Loc-Mir-92-P1d  Mal-Mir-92-P1d  Mdo-Mir-92-P1d  Mml-Mir-92-P1d  Mmr-Mir-92-P1d  Mmu-Mir-92-P1d  Mun-Mir-92-P1d  Oan-Mir-92-P1d  Obi-Mir-92  Ocu-Mir-92-P1d  Pab-Mir-92-P1d  Pbv-Mir-92-P1d  Rno-Mir-92-P1d  Sha-Mir-92-P1d  Sme-Mir-92  Spt-Mir-92-P1d  Sto-Mir-92-P1d  Tgu-Mir-92-P1d  Xtr-Mir-92-P1d 
Node of Origin (locus) X. laevis
Node of Origin (family) Bilateria
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030739.1: 98444990-98445052 [+] UCSC Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
GCCCCUCACUUACAUAUCUGGAUAUACAGAAGGAUCGGGAUGCUGUGCACUGUUGUCCUUUCACCUGCCAAUAUUGCACUCGUCCCGGCCUCCUGCGUCUCUGGGCUACUCUGCCUUAUGUUU
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Structure
        10          20        30        40        50        60  
GCCCCUCACUUACAUAU--|UG  U UA   A   A        CU     C    GUCCUUU 
                   C  GA A  CAG AGG UCGGGAUG  GUGCA UGUU       \
                   G  CU U  GUC UCC GGCCCUGC  CACGU AUAA       C
UUUGUAUUCCGUCUCAUCG^GU  C GC   C   -        U-     U    CCGUCCA 
 120       110       100        90         80         70
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Em
Star sequence

Xla-Mir-92-P1d2_5p*
mirBase accessionNone
Sequence 
0- AGGAUCGGGAUGCUGUGCACUGUU -24
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Mature sequence

Xla-Mir-92-P1d2_3p
mirBase accessionNone
Sequence 
41- UAUUGCACUCGUCCCGGCCUCC -63
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