| MirGeneDB ID | Bta-Mir-92-P1d |
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| Family name |
MIR-92 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-92b
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| Paralogues |
Bta-Mir-92-P1a
Bta-Mir-92-P1c
Bta-Mir-92-P2a
Bta-Mir-92-P2c
Bta-Mir-92-P2d
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| Orthologues |
Ami-Mir-92-P1d
Asu-Mir-92
Bfl-Mir-92-o1
Bla-Mir-92-o1
Cel-Mir-92
Cfa-Mir-92-P1d
Cja-Mir-92-P1d
Cmi-Mir-92-P1d
Cpi-Mir-92-P1d
Cpo-Mir-92-P1d
Dno-Mir-92-P1d
Dre-Mir-92-P1d
Eca-Mir-92-P1d
Esc-Mir-92
Ete-Mir-92-P1d
Gja-Mir-92-P1d
Gsp-Mir-92
Hmi-Mir-92
Hsa-Mir-92-P1d
Isc-Mir-92
Laf-Mir-92-P1d
Lch-Mir-92-P1d
Loc-Mir-92-P1d
Mal-Mir-92-P1d
Mdo-Mir-92-P1d
Mml-Mir-92-P1d
Mmr-Mir-92-P1d
Mmu-Mir-92-P1d
Mun-Mir-92-P1d
Oan-Mir-92-P1d
Obi-Mir-92
Ocu-Mir-92-P1d
Pab-Mir-92-P1d
Pbv-Mir-92-P1d
Rno-Mir-92-P1d
Sha-Mir-92-P1d
Sme-Mir-92
Spt-Mir-92-P1d
Sto-Mir-92-P1d
Tgu-Mir-92-P1d
Xla-Mir-92-P1d1
Xla-Mir-92-P1d2
Xtr-Mir-92-P1d
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| Node of Origin (locus) |
Gnathostomata
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| Node of Origin (family) |
Bilateria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037330.1: 15425813-15425875 [-]
UCSC
Ensembl
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| Seed |
AUUGCAC |
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Precursor
(pre-Mir +30nt flank) |
GAGCGGGAUUCCGGGCCCCGGGCGGGCGGGAGGGACGGGACGCGGUGCAGUGUUGUUCUUUCCCCUGCCAAUAUUGCACUCGUCCCGGCCUCCGGCCCCCUCGGCCCCCCGGCCUCCCCCUCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GAGCGGGAUUCCGGGCC--| C G GA C GUUCUUU
CCGGG GGGC GGAGG CGGGACG GGUGCAGUGUU \
GGCUC CCCG CCUCC GCCCUGC UCACGUUAUAA C
ACUCCCCCUCCGGCCCCCC^ C G G- - CCGUCCC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-92-P1d_5p* |
| mirBase accession | None |
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| Sequence |
0- AGGGACGGGACGCGGUGCAGUGUU -24
Get sequence
|
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| Mature sequence |
Bta-Mir-92-P1d_3p |
| mirBase accession | MIMAT0009384 |
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| Sequence |
41- UAUUGCACUCGUCCCGGCCUCC -63
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-92b
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