MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-92-P1d

Family name MIR-92 (all species)
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-92-P1a1  Mal-Mir-92-P1a2  Mal-Mir-92-P2d 
Orthologues Ami-Mir-92-P1d  Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Bta-Mir-92-P1d  Cel-Mir-92  Cfa-Mir-92-P1d  Cja-Mir-92-P1d  Cmi-Mir-92-P1d  Cpi-Mir-92-P1d  Cpo-Mir-92-P1d  Dno-Mir-92-P1d  Dre-Mir-92-P1d  Eca-Mir-92-P1d  Esc-Mir-92  Ete-Mir-92-P1d  Gja-Mir-92-P1d  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P1d  Isc-Mir-92  Laf-Mir-92-P1d  Lch-Mir-92-P1d  Loc-Mir-92-P1d  Mdo-Mir-92-P1d  Mml-Mir-92-P1d  Mmr-Mir-92-P1d  Mmu-Mir-92-P1d  Mun-Mir-92-P1d  Oan-Mir-92-P1d  Obi-Mir-92  Ocu-Mir-92-P1d  Pab-Mir-92-P1d  Pbv-Mir-92-P1d  Rno-Mir-92-P1d  Sha-Mir-92-P1d  Sme-Mir-92  Spt-Mir-92-P1d  Sto-Mir-92-P1d  Tgu-Mir-92-P1d  Xla-Mir-92-P1d1  Xla-Mir-92-P1d2  Xtr-Mir-92-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884897.1: 1539729-1539792 [+] UCSC Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
CGUGUGGUGCGUUUCCUCCCGGGGUCGGGCAGGUCCGGGAUGAGGUGCACUGUUGUCACGUCCCCACUCCAAUAUUGCACUUAUCCCGGCCUCCCCGGCCCAGGGGCCCCAACCCCCCUCACCC
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Structure
        10          20        30        40        50        60  
CGUGUGGUGCGUUUCCU--|  G        C   U          G    C    GUCACGU 
                   CCC GGGUCGGG AGG CCGGGAUGAG UGCA UGUU       C
                   GGG CCCGGCCC UCC GGCCCUAUUC ACGU AUAA       C
CCCACUCCCCCCAACCCCG^  A        C   -          -    U    CCUCACC 
  120       110       100        90         80         70
Deep sequencing
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CommentThere is a second Drosha cut -1 on the 5p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-92-P1d_5p*
mirBase accessionNone
Sequence 
0- AGGUCCGGGAUGAGGUGCACUGUU -24
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Mature sequence

Mal-Mir-92-P1d_3p
mirBase accessionNone
Sequence 
42- UAUUGCACUUAUCCCGGCCUCC -64
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