MirGeneDB 3.0
MirGeneDB ID

Sro-Mir-92-P18

Family name MIR-92 (all species)
Species Roscoff worm (Symsagittifera roscoffensis)
MiRBase ID
Paralogues Sro-Mir-92-P16  Sro-Mir-92-P17  Sro-Mir-92-P19  Sro-Mir-92-P20 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Spu-Mir-92-o18 
Node of Origin (locus) S. roscoffensis
Node of Origin (family) Bilateria
Genome context
(GCA_025153585.1_SymRos_1_5_genomic)		 JANVAR010000525.1: 3306-3370 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P18)		 Mir-92-P19 JANVAR010000525.1: 3084-3156 [-] UCSC Ensembl
Mir-92-P18 JANVAR010000525.1: 3306-3370 [-] UCSC Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
CGUGAAAACUCAUCGAAGAGCUUCCUUUCAUCAGGCAGUUUCGUGUGAAAUAUUGAAUAUUCUGCUUCUAAAUAUUGCACGGUCCUGGCCUGGUGAACUGCAUGACUCAUGGCACAGUUUAUGAC
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Structure
        10             20        30         40        50        60  
CGUGAAAACUCAUCGAAGA-----| UUCCU          -  UU      GA      GAAUAUU 
                        GC     UUCAUCAGGC AG  UCGUGU  AAUAUU       C
                        CG     AAGUGGUCCG UC  GGCACG  UUAUAA       U
CAGUAUUUGACACGGUACUCAGUA^ UC---          G  CU      --      AUCUUCG 
   120       110       100           90        80          70
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending new data.
3' NTU No
MotifsNo
Tissue expression
- +
Po
Star sequence

Sro-Mir-92-P18_5p*
mirBase accessionNone
Sequence 
0- UCAGGCAGUUUCGUGUGAAAUAUU -24
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Mature sequence

Sro-Mir-92-P18_3p
mirBase accessionNone
Sequence 
42- UAUUGCACGGUCCUGGCCUGGUG -65
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