MirGeneDB 3.0

26 microRNA genes with node of origin S. roscoffensis
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Sro-Mir-9-P35a None MIR-9 AAAGCUA None None JANVAR010000473.1 1213595 1213662 + S. roscoffensis Bilateria No
Sro-Mir-9-P35b None MIR-9 AAAGCUA None None JANVAR010000473.1 1259271 1259338 + S. roscoffensis Bilateria No
Sro-Mir-9-P36 None MIR-9 AAAGCUA None None JANVAR010000606.1 626870 626929 + S. roscoffensis Bilateria No
Sro-Mir-10-P1w None MIR-10 ACCCUGU None None JANVAR010000364.1 599067 599140 + S. roscoffensis Eumetazoa No 1
Sro-Mir-10-P1x None MIR-10 ACCCUGU None None JANVAR010000364.1 599494 599556 + S. roscoffensis Eumetazoa No
Sro-Mir-29-P1p1 None MIR-29 AGCACCA None None JANVAR010000541.1 103104 103159 - S. roscoffensis Bilateria No
Sro-Mir-29-P1p2 None MIR-29 AGCACCA None None JANVAR010000541.1 217075 217130 + S. roscoffensis Bilateria No
Sro-Mir-29-P2p1 None MIR-29 AGCACCA None None JANVAR010000541.1 102958 103014 - S. roscoffensis Bilateria No
Sro-Mir-29-P2p2 None MIR-29 AGCACCA None None JANVAR010000541.1 102958 103014 - S. roscoffensis Bilateria No
Sro-Mir-34-P23 None MIR-34 GGCAGUG None None JANVAR010000638.1 302897 302965 + S. roscoffensis Bilateria No 1
Sro-Mir-34-P24 None MIR-34 GGCAGUG None None JANVAR010000646.1 1420981 1421052 + S. roscoffensis Bilateria No
Sro-Mir-92-P16 None MIR-92 AUUGCAC None None JANVAR010000529.1 864397 864461 - S. roscoffensis Bilateria No
Sro-Mir-92-P17 None MIR-92 AUUGCAC None None JANVAR010000529.1 864175 864247 - S. roscoffensis Bilateria No
Sro-Mir-92-P18 None MIR-92 AUUGCAC None None JANVAR010000525.1 3306 3370 - S. roscoffensis Bilateria No
Sro-Mir-92-P19 None MIR-92 AUUGCAC None None JANVAR010000525.1 3084 3156 - S. roscoffensis Bilateria No
Sro-Mir-92-P20 None MIR-92 AUUGCAC None None JANVAR010000186.1 1077764 1077832 - S. roscoffensis Bilateria No
Sro-Mir-190-P28 None MIR-190 GAUAUGU None None JANVAR010000665.1 1779729 1779799 + S. roscoffensis Bilateria No
Sro-Mir-190-P29 None MIR-190 GAUAUGU None None JANVAR010000665.1 1781201 1781270 + S. roscoffensis Bilateria No
Sro-Mir-190-P30 None MIR-190 GAUAUGU None None JANVAR010000665.1 1781371 1781438 + S. roscoffensis Bilateria No
Sro-Mir-190-P31 None MIR-190 GAUAUGU None None JANVAR010000655.1 2511695 2511758 - S. roscoffensis Bilateria No 1
Sro-Mir-252-P1o1 None MIR-252 AAGUAGU None None JANVAR010002596.1 7130 7210 - S. roscoffensis Bilateria No
Sro-Mir-252-P1o2 None MIR-252 UAAGUAG None None JANVAR010000765.1 131927 132009 - S. roscoffensis Bilateria Unknown
Sro-Mir-12496-P1 None MIR-12496 UGUGCAU None None JANVAR010000125.1 175645 175709 - S. roscoffensis Xenacoelomorpha No
Sro-Mir-12496-P2 None MIR-12496 UGUGCAU None None JANVAR010000125.1 175530 175582 - S. roscoffensis Xenacoelomorpha No
Sro-Mir-12496-P3 None MIR-12496 UGUGCAU None None JANVAR010000125.1 175402 175458 - S. roscoffensis Xenacoelomorpha No
Sro-Novel-1 None SRO-NOVEL-1 GUGACCG None None JANVAR010001102.1 64632 64698 - S. roscoffensis S. roscoffensis No

(red - mature/co-mature, blue - star)

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